RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 PRELPP51888 382 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 CTTNQ14247 550 aaKnown RBP13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 ASTE1Q2TB18 679 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 TBC1D10BQ4KMP7 808 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 MICALL2Q8IY33 904 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 PIGOQ8TEQ8 1089 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 HDAC7Q8WUI4 952 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 HINFPQ9BQA5 517 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 MTFR1LQ9H019 292 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 SMARCAL1Q9NZC9 954 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 SFI1A8K8P3 1242 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 PPP1R12AO14974 1030 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 BUB1O43683 1085 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 TACC1O75410 805 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 FAM107AO95990 144 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 ARP10275 920 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 CXCR5P32302 372 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 EPS15P42566 896 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 KCNA1Q09470 495 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 RAPGEF1Q13905 1077 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 CRYMQ14894 314 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 CEP55Q53EZ4 464 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 NFRKBQ6P4R8 1299 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 MREGQ8N565 214 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 MYCBPAPQ8TBZ2 947 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 DYDC2Q96IM9 177 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 RNPC3Q96LT9 517 aaKnown RBP13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 HSD17B14Q9BPX1 270 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 IKZF4Q9H2S9 585 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 SLC40A1Q9NP59 571 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 EHD2Q9NZN4 543 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 ZBTB39O15060 712 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 ICAM1P05362 532 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 ACTN1P12814 892 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 RPS12P25398 132 aaKnown RBP13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 MARSP56192 900 aaKnown RBP13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 RNF187Q5TA31 235 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 SFMBT2Q5VUG0 894 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 C6orf89Q6UWU4 347 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 NLRP14Q86W24 1093 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 HOOK2Q96ED9 719 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 EHMT1Q9H9B1 1298 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 COL20A1Q9P218 1284 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 RABGAP1Q9Y3P9 1069 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 GJA3Q9Y6H8 435 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 NFIBO00712 420 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 CETN3O15182 167 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 WDR46O15213 610 aaKnown RBP13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 EYA4O95677 639 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 GNA14O95837 355 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 NR1D1P20393 614 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 SCP2P22307 547 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 CALRP27797 417 aaKnown RBP13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 KCNH2Q12809 1159 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 PPP2R5CQ13362 524 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 SNCBQ16143 134 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 CFAP58Q5T655 872 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 ZC3H3Q8IXZ2 948 aaKnown RBP13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 IQCKQ8N0W5 287 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 FAM133AQ8N9E0 248 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 CCT8L2Q96SF2 557 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 HACL1Q9UJ83 578 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 HYOU1Q9Y4L1 999 aa13.76□□□□□ -0.21
PCDHGA4-202ENST00000612927 HMGB1P1B2RPK0 211 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 GAS7O60861 476 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 SLITRK3O94933 977 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 MDH1P40925 334 aaKnown RBP13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 ATP1A2P50993 1020 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 HSD17B4P51659 736 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 MRPS25P82663 173 aaKnown RBP13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 SLC9C1Q4G0N8 1177 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 TPH2Q8IWU9 490 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 CLEC4DQ8WXI8 215 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 KIAA1683Q9H0B3 1180 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 DEFB129Q9H1M3 183 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 MYH10P35580 1976 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 GCNT3O95395 438 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 KNOP1Q1ED39 458 aaKnown RBP13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 DCAF17Q5H9S7 520 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 C8orf74Q6P047 294 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 EPM2AIP1Q7L775 607 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 TAX1BP1Q86VP1 789 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 FMNL3Q8IVF7 1028 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 IFT20Q8IY31 132 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 CPXCR1Q8N123 301 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 ZNF577Q9BSK1 485 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 EDEM3Q9BZQ6 932 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 GANQ9H2C0 597 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 UNC45AQ9H3U1 944 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 TUFT1Q9NNX1 390 aa13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 CNOT7Q9UIV1 285 aaKnown RBP13.75□□□□□ -0.21
PCDHGA4-202ENST00000612927 SSU72P8A0A1W2PR75 194 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 KIF3CO14782 793 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 CLIC2O15247 247 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 TBCAO75347 108 aaKnown RBP13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 AKAP3O75969 853 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms