RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CEP131Q9UPN4 1083 aa11.97□□□□□ -0.49
TUBE1-210ENST00000604967 NLRC5Q86WI3 1866 aa11.97□□□□□ -0.49
TUBE1-210ENST00000604967 ARID2Q68CP9 1835 aa11.97□□□□□ -0.49
TUBE1-210ENST00000604967 MYO7AQ13402 2215 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 BRWD1Q9NSI6 2320 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 A0A087WZ62 844 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 MEIS3P2A8K0S8 358 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 M0QZ92 97 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 GRM6O15303 877 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 MED24O75448 989 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 FGFR1P11362 822 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 EIF4BP23588 611 aaKnown RBP11.96□□□□□ -0.49
TUBE1-210ENST00000604967 U2AF2P26368 475 aaKnown RBP eCLIP11.96□□□□□ -0.491e-13■■■■■ 44
TUBE1-210ENST00000604967 YWHABP31946 246 aaKnown RBP11.96□□□□□ -0.49
TUBE1-210ENST00000604967 BMPR1AP36894 532 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 SARSP49591 514 aaKnown RBP11.96□□□□□ -0.49
TUBE1-210ENST00000604967 PAN2Q504Q3 1202 aaKnown RBP11.96□□□□□ -0.49
TUBE1-210ENST00000604967 LRRC55Q6ZSA7 311 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 NPAS4Q8IUM7 802 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 NOSTRINQ8IVI9 506 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 FDXACB1Q9BRP7 624 aaPredicted RBP11.96□□□□□ -0.49
TUBE1-210ENST00000604967 FTHL17Q9BXU8 183 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 BACH2Q9BYV9 841 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 FOXP1Q9H334 677 aaPredicted RBP11.96□□□□□ -0.49
TUBE1-210ENST00000604967 BRMS1Q9HCU9 246 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 SUCLA2Q9P2R7 463 aaPredicted RBP11.96□□□□□ -0.49
TUBE1-210ENST00000604967 PCDHB6Q9Y5E3 794 aa11.96□□□□□ -0.49
TUBE1-210ENST00000604967 C5orf67F2Z3F1 127 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 H3BNC9 293 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 DLL1O00548 723 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 LYPLA2O95372 231 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 HMGN5P82970 282 aaKnown RBP11.95□□□□□ -0.5
TUBE1-210ENST00000604967 ZNF598Q86UK7 904 aaKnown RBP11.95□□□□□ -0.5
TUBE1-210ENST00000604967 TPH2Q8IWU9 490 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 SLFN12Q8IYM2 578 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 FIBCD1Q8N539 461 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 PIGOQ8TEQ8 1089 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 PRPF31Q8WWY3 499 aaKnown RBP11.95□□□□□ -0.5
TUBE1-210ENST00000604967 CEP170P1Q96L14 293 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 MAP7D2Q96T17 732 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 PCDHA12Q9UN75 941 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 PCDHGC5Q9Y5F6 944 aa11.95□□□□□ -0.5
TUBE1-210ENST00000604967 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
TUBE1-210ENST00000604967 B4GALT3O60512 393 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 GJB2P29033 226 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 HOXA11P31270 313 aaPredicted RBP11.94□□□□□ -0.5
TUBE1-210ENST00000604967 CTNNB1P35222 781 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 KCNQ1P51787 676 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 GPM6BQ13491 265 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 TRIM29Q14134 588 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 BTG3Q14201 252 aaPredicted RBP11.94□□□□□ -0.5
TUBE1-210ENST00000604967 CLLU1OSQ5K130 101 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 TTC38Q5R3I4 469 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 SLC24A5Q71RS6 500 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 CATSPER3Q86XQ3 398 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 RHPN2Q8IUC4 686 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 ASAP3Q8TDY4 903 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 NECAB3Q96P71 396 aaPredicted RBP11.94□□□□□ -0.5
TUBE1-210ENST00000604967 NAP1L4Q99733 375 aaKnown RBP11.94□□□□□ -0.5
TUBE1-210ENST00000604967 CWH43Q9H720 699 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 ZSWIM4Q9H7M6 989 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 ALG13Q9NP73 1137 aaKnown RBP11.94□□□□□ -0.5
TUBE1-210ENST00000604967 GPRC5CQ9NQ84 441 aa11.94□□□□□ -0.5
TUBE1-210ENST00000604967 RALGAPA2Q2PPJ7 1873 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 DENND3A2RUS2 1198 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 PP2D1A8MPX8 630 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 GPR182O15218 404 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 CSPG5O95196 566 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 ITGB1P05556 798 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 BMP1P13497 986 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 TMOD1P28289 359 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 GTF2F1P35269 517 aaKnown RBP eCLIP11.93□□□□□ -0.5
TUBE1-210ENST00000604967 IRS1P35568 1242 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 TECP42680 631 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 RARRES1P49788 294 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 AFF1P51825 1210 aaKnown RBP11.93□□□□□ -0.5
TUBE1-210ENST00000604967 LAMTOR4Q0VGL1 99 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 EMC2Q15006 297 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 XKR9Q5GH70 373 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 UBXN11Q5T124 520 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 ECHDC2Q86YB7 292 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 CMTR2Q8IYT2 770 aaKnown RBP11.93□□□□□ -0.5
TUBE1-210ENST00000604967 NLRP7Q8WX94 980 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 NLRP4Q96MN2 994 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 CASD1Q96PB1 797 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 ASB2Q96Q27 587 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 POLD4Q9HCU8 107 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 THEGQ9P2T0 379 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 PLAGL2Q9UPG8 496 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 COL4A3BPQ9Y5P4 624 aa11.93□□□□□ -0.5
TUBE1-210ENST00000604967 TBKBP1A7MCY6 615 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 BAG4O95429 457 aaKnown RBP11.92□□□□□ -0.5
TUBE1-210ENST00000604967 OR52Z1P0C646 297 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 SRGAP2CP0DJJ0 459 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 ARL2P36404 184 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 PBX3P40426 434 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 CUL4AQ13619 759 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 COL19A1Q14993 1142 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms