RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 IFIH1Q9BYX4 1025 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-217ENST00000598558 ERVK-5Q9HDB9 667 aa15.83■□□□□ 0.12
SHKBP1-217ENST00000598558 SQORQ9Y6N5 450 aa15.83■□□□□ 0.12
SHKBP1-217ENST00000598558 WDR81Q562E7 1941 aa15.83■□□□□ 0.12
SHKBP1-217ENST00000598558 TANC1Q9C0D5 1861 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 ENPP3O14638 875 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 SPTLC2O15270 562 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 MGEA5O60502 916 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 DGAT1O75907 488 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 EYA4O95677 639 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 RPLP2P05387 115 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 DARSP14868 501 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 PBX2P40425 430 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 RABGGTBP53611 331 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 LAMTOR4Q0VGL1 99 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 IKBKEQ14164 716 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 STK38Q15208 465 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 PADI6Q6TGC4 694 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 AK8Q96MA6 479 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 MTRQ99707 1265 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 MINDY3Q9H8M7 445 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 IFT122Q9HBG6 1241 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 BLOC1S4Q9NUP1 217 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 ST3GAL5Q9UNP4 418 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 STK24Q9Y6E0 443 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 SLC4A7Q9Y6M7 1214 aa15.82■□□□□ 0.12
SHKBP1-217ENST00000598558 A0A087X0B3 334 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 ABHD14A-ACY1A0A1B0GW23 586 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 ARHGEF35A5YM69 484 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 M0QZ92 97 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 YEATS4O95619 227 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 SRGAP2CP0DJJ0 459 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 ACTN1P12814 892 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 MYOGP15173 224 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 CYP11B2P19099 503 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 GLRA2P23416 452 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 EIF4BP23588 611 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 MYH9P35579 1960 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 UBA7P41226 1012 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 DNM2P50570 870 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 AXDND1Q5T1B0 1012 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 KRI1Q8N9T8 703 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 BSNDQ8WZ55 320 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 SYMPKQ92797 1274 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 NLRP4Q96MN2 994 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 JPH2Q9BR39 696 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 RUSC1Q9BVN2 902 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 CCSER1Q9C0I3 900 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 TRIOBPQ9H2D6 2365 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 ATP6V0A4Q9HBG4 840 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 RCOR1Q9UKL0 485 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 DNM3Q9UQ16 869 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 COL4A3BPQ9Y5P4 624 aa15.81■□□□□ 0.12
SHKBP1-217ENST00000598558 SIP14410 1827 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 PPP6R2O75170 966 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 RPS6KA5O75582 802 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 BAIAP3O94812 1187 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 PLCG1P19174 1290 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 NFX1Q12986 1120 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 DSC3Q14574 896 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 ARSHQ5FYA8 562 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 RINT1Q6NUQ1 792 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 C1orf186Q6ZWK4 172 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 DAW1Q8N136 415 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 USP38Q8NB14 1042 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 NLRP7Q8WX94 980 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 PSPC1Q8WXF1 523 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 PANK2Q9BZ23 570 aa15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 POLR3FQ9H1D9 316 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 YBX2Q9Y2T7 364 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-217ENST00000598558 LAMA3Q16787 3333 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 NPHP3-ACAD11A0A0J9YXS1 232 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 ARHGEF15O94989 841 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 PLA2G4BP0C869 781 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 ATP2A2P16615 1042 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 SLC12A3P55017 1021 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 MAPK7Q13164 816 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 PAK2Q13177 524 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 CAPSQ13938 189 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 NAALADL2Q58DX5 795 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 FAM102BQ5T8I3 360 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 SHC4Q6S5L8 630 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 EXOC8Q8IYI6 725 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 SYT2Q8N9I0 419 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 TCP11Q8WWU5 503 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 APBB2Q92870 758 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 PBX4Q9BYU1 374 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 PCDHA7Q9UN72 937 aa15.79■□□□□ 0.12
SHKBP1-217ENST00000598558 KAT6AQ92794 2004 aa15.78■□□□□ 0.12
SHKBP1-217ENST00000598558 GAS2O43903 313 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-217ENST00000598558 SMAD3P84022 425 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-217ENST00000598558 MCM6Q14566 821 aa15.78■□□□□ 0.12
SHKBP1-217ENST00000598558 ATL3Q6DD88 541 aa15.78■□□□□ 0.12
SHKBP1-217ENST00000598558 FAM117BQ6P1L5 589 aa15.78■□□□□ 0.12
SHKBP1-217ENST00000598558 ZNF410Q86VK4 478 aa15.78■□□□□ 0.12
SHKBP1-217ENST00000598558 HERC6Q8IVU3 1022 aa15.78■□□□□ 0.12
SHKBP1-217ENST00000598558 CRIPAKQ8N1N5 446 aa15.78■□□□□ 0.12
SHKBP1-217ENST00000598558 RNF149Q8NC42 400 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms