RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 DOCK5Q9H7D0 1870 aa13.26□□□□□ -0.29
DDX39A-219ENST00000592927 MAFBQ9Y5Q3 323 aaPredicted RBP13.26□□□□□ -0.29
DDX39A-219ENST00000592927 STK24Q9Y6E0 443 aa13.26□□□□□ -0.29
DDX39A-219ENST00000592927 GRIN2DO15399 1336 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 IGSF9BQ9UPX0 1349 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 SYCE3A1L190 88 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 QARSP47897 775 aaKnown RBP13.25□□□□□ -0.29
DDX39A-219ENST00000592927 CYP4A11Q02928 519 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 IER5LQ5T953 404 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 KRT79Q5XKE5 535 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 HAUS3Q68CZ6 603 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 NFRKBQ6P4R8 1299 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 TPH2Q8IWU9 490 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 SLC43A3Q8NBI5 491 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 TRPV6Q9H1D0 765 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 RNPEPQ9H4A4 650 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 ZSWIM4Q9H7M6 989 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 RGL1Q9NZL6 768 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 LMCD1Q9NZU5 365 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 CCDC39Q9UFE4 941 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 CFAP54Q96N23 3096 aa13.25□□□□□ -0.29
DDX39A-219ENST00000592927 POLR2DO15514 142 aaKnown RBP13.24□□□□□ -0.29
DDX39A-219ENST00000592927 SLITRK3O94933 977 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 SMIM10L2AP0DMW4 78 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 SMIM10L2BP0DMW5 78 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 CCT6AP40227 531 aaKnown RBP13.24□□□□□ -0.29
DDX39A-219ENST00000592927 UBA7P41226 1012 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 PRKCEQ02156 737 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 PTPN11Q06124 597 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-219ENST00000592927 CTTNQ14247 550 aaKnown RBP13.24□□□□□ -0.29
DDX39A-219ENST00000592927 PLCB4Q15147 1175 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 UGCGQ16739 394 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 SPECC1Q5M775 1068 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 KRBA2Q6ZNG9 492 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 TRMT1LQ7Z2T5 733 aaKnown RBP13.24□□□□□ -0.29
DDX39A-219ENST00000592927 DEFB128Q7Z7B8 93 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 IQUBQ8NA54 791 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 CNNM3Q8NE01 707 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 PPP1R13LQ8WUF5 828 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 BBXQ8WY36 941 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-219ENST00000592927 EPSTI1Q96J88 318 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 FAM167AQ96KS9 214 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 HSD17B14Q9BPX1 270 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 LXNQ9BS40 222 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 POLR3CQ9BUI4 534 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-219ENST00000592927 TUFT1Q9NNX1 390 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 NRBP2Q9NSY0 501 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 HDAC6Q9UBN7 1215 aa13.24□□□□□ -0.29
DDX39A-219ENST00000592927 PP2D1A8MPX8 630 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 ZNF862O60290 1169 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 HBP1O60381 514 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 OATP04181 439 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 GNAT1P11488 350 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 ATP4AP20648 1035 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 RPA1P27694 616 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 CDC25AP30304 524 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 PPFIA1Q13136 1202 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 CAMK4Q16566 473 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 LONRF3Q496Y0 759 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 XKR3Q5GH77 459 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 SESTD1Q86VW0 696 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 CATSPER3Q86XQ3 398 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 HERC6Q8IVU3 1022 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 C4orf19Q8IY42 314 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 PHOSPHO2Q8TCD6 241 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 GDPD5Q8WTR4 605 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 SLC9A7Q96T83 725 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 CUEDC2Q9H467 287 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 GTF2IRD1Q9UHL9 959 aa13.23□□□□□ -0.29
DDX39A-219ENST00000592927 NRCAMQ92823 1304 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 C17orf102A2RUQ5 167 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 RRN3P2A6NIE6 340 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 B4GALT4O60513 344 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 MED24O75448 989 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 PFKMP08237 780 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 SPATA31C1P0DKV0 1188 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 CCDC192P0DO97 292 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 INSRRP14616 1297 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 ZRSR1Q15695 479 aaKnown RBP13.22□□□□□ -0.29
DDX39A-219ENST00000592927 GRIK4Q16099 956 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 ZNF484Q5JVG2 852 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 SASS6Q6UVJ0 657 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 USP49Q70CQ1 688 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 OTUD6AQ7L8S5 288 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 CABP7Q86V35 215 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 CEP57L1Q8IYX8 460 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 MAGEF1Q9HAY2 307 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 SETD4Q9NVD3 440 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 FAM86C1Q9NVL1 165 aa13.22□□□□□ -0.29
DDX39A-219ENST00000592927 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-219ENST00000592927 SEPT9Q9UHD8 586 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-219ENST00000592927 KDM3AQ9Y4C1 1321 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 GOLGA6L3A6NEY3 463 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms