RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ANO5Q75V66 913 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 FAM228AQ86W67 206 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 NPAS4Q8IUM7 802 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 MRPL38Q96DV4 380 aaKnown RBP15.58■□□□□ 0.08
CLIP3-205ENST00000592017 ZNF668Q96K58 619 aaPredicted RBP15.58■□□□□ 0.08
CLIP3-205ENST00000592017 CEP170P1Q96L14 293 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 SCLT1Q96NL6 688 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 CEP89Q96ST8 783 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 NIFKQ9BYG3 293 aaKnown RBP15.58■□□□□ 0.08
CLIP3-205ENST00000592017 ADAMTS10Q9H324 1103 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 ZSWIM4Q9H7M6 989 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.08
CLIP3-205ENST00000592017 PCDHB6Q9Y5E3 794 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 ADGRA3Q8IWK6 1321 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 KAT6AQ92794 2004 aa15.58■□□□□ 0.08
CLIP3-205ENST00000592017 YWHABP31946 246 aaKnown RBP15.57■□□□□ 0.08
CLIP3-205ENST00000592017 GATMP50440 423 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 TOB1P50616 345 aaPredicted RBP15.57■□□□□ 0.08
CLIP3-205ENST00000592017 KCNQ1P51787 676 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 NPEPPSP55786 919 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 NLRP11P59045 1033 aaKnown RBP15.57■□□□□ 0.08
CLIP3-205ENST00000592017 BTG3Q14201 252 aaPredicted RBP15.57■□□□□ 0.08
CLIP3-205ENST00000592017 HSCBQ8IWL3 235 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 C4orf19Q8IY42 314 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 NEK9Q8TD19 979 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 ADAMTS19Q8TE59 1207 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 CLP1Q92989 425 aaKnown RBP15.57■□□□□ 0.08
CLIP3-205ENST00000592017 HLA-CQ95604 372 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
CLIP3-205ENST00000592017 CYP26B1Q9NR63 512 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 COG5Q9UP83 839 aa15.57■□□□□ 0.08
CLIP3-205ENST00000592017 BDP1A6H8Y1 2624 aa15.56■□□□□ 0.08
CLIP3-205ENST00000592017 GPR182O15218 404 aa15.56■□□□□ 0.08
CLIP3-205ENST00000592017 IBSPP21815 317 aaPredicted RBP15.56■□□□□ 0.08
CLIP3-205ENST00000592017 CTNNB1P35222 781 aa15.56■□□□□ 0.08
CLIP3-205ENST00000592017 POLGP54098 1239 aaPredicted RBP15.56■□□□□ 0.08
CLIP3-205ENST00000592017 DRP2Q13474 957 aa15.56■□□□□ 0.08
CLIP3-205ENST00000592017 DSC3Q14574 896 aa15.56■□□□□ 0.08
CLIP3-205ENST00000592017 ZNF579Q8NAF0 562 aaKnown RBP15.56■□□□□ 0.08
CLIP3-205ENST00000592017 NECAB3Q96P71 396 aaPredicted RBP15.56■□□□□ 0.08
CLIP3-205ENST00000592017 ADAM2Q99965 735 aa15.56■□□□□ 0.08
CLIP3-205ENST00000592017 RGS18Q9NS28 235 aa15.56■□□□□ 0.08
CLIP3-205ENST00000592017 MRPL42Q9Y6G3 142 aaKnown RBP15.56■□□□□ 0.08
CLIP3-205ENST00000592017 COL4A6Q14031 1691 aa15.56■□□□□ 0.08
CLIP3-205ENST00000592017 SIP14410 1827 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 C9IYK1 514 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 C5orf67F2Z3F1 127 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 ZBTB39O15060 712 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 GRM6O15303 877 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 SLITRK3O94933 977 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 RB1P06400 928 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 STAG3L1P0CL83 205 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 SARSP49591 514 aaKnown RBP15.55■□□□□ 0.08
CLIP3-205ENST00000592017 DNM2P50570 870 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 FAM189BP81408 668 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 PTGDRQ13258 359 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 PTPROQ16827 1216 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 AAK1Q2M2I8 961 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 RILPL1Q5EBL4 403 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 XKR9Q5GH70 373 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 OTUD6AQ7L8S5 288 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 CMTR2Q8IYT2 770 aaKnown RBP15.55■□□□□ 0.08
CLIP3-205ENST00000592017 NLRP7Q8WX94 980 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 SLC7A3Q8WY07 619 aa15.55■□□□□ 0.08
CLIP3-205ENST00000592017 A0A087WWV3 80 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 IGKV6-21A0A0C4DH24 114 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 DENND3A2RUS2 1198 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 MAFO75444 373 aaPredicted RBP15.54■□□□□ 0.08
CLIP3-205ENST00000592017 PDCP20941 246 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 EIF4BP23588 611 aaKnown RBP15.54■□□□□ 0.08
CLIP3-205ENST00000592017 GPC3P51654 580 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 PAN2Q504Q3 1202 aaKnown RBP15.54■□□□□ 0.08
CLIP3-205ENST00000592017 FAM43BQ6ZT52 329 aaPredicted RBP15.54■□□□□ 0.08
CLIP3-205ENST00000592017 SLC24A5Q71RS6 500 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 C4orf32Q8N8J7 132 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 ERMNQ8TAM6 284 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 SNX21Q969T3 373 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 INTS4Q96HW7 963 aaKnown RBP15.54■□□□□ 0.08
CLIP3-205ENST00000592017 UHRF1Q96T88 793 aaPredicted RBP15.54■□□□□ 0.08
CLIP3-205ENST00000592017 HSD17B14Q9BPX1 270 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 JPH2Q9BR39 696 aaPredicted RBP15.54■□□□□ 0.08
CLIP3-205ENST00000592017 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.54■□□□□ 0.08
CLIP3-205ENST00000592017 SUCLA2Q9P2R7 463 aaPredicted RBP15.54■□□□□ 0.08
CLIP3-205ENST00000592017 LRFN2Q9ULH4 789 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 PCDHB7Q9Y5E2 793 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 TTC3P53804 2025 aa15.54■□□□□ 0.08
CLIP3-205ENST00000592017 NCOR1O75376 2440 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.53■□□□□ 0.08
CLIP3-205ENST00000592017 TNFRSF10AO00220 468 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 MED24O75448 989 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 DARSP14868 501 aaKnown RBP15.53■□□□□ 0.08
CLIP3-205ENST00000592017 RFC5P40937 340 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 EMC2Q15006 297 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 TCEAL5Q5H9L2 206 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 ODR4Q5SWX8 454 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 FAM102BQ5T8I3 360 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 HAUS3Q68CZ6 603 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 RHPN2Q8IUC4 686 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 ZNF710Q8N1W2 664 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms