RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 BRAPQ7Z569 592 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 RNF180Q86T96 592 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 RHBDD1Q8TEB9 315 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 DIS3LQ8TF46 1054 aaKnown RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 AFG1LQ8WV93 481 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 CRYGNQ8WXF5 182 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 GJA10Q969M2 543 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 SPATA33Q96N06 139 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 TGIF2Q9GZN2 237 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 ZNF395Q9H8N7 513 aaPredicted RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 AGO4Q9HCK5 861 aaKnown RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 AK5Q9Y6K8 562 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 ALPK3Q96L96 1907 aa7.21□□□□□ -1.25
VPS4B-205ENST00000591383 MKI67P46013 3256 aaKnown RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 A6NHS1 94 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 DNM1LO00429 736 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 MSH4O15457 936 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 ADAMTS4O75173 837 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 ZIC2O95409 532 aaPredicted RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 MMP3P08254 477 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 CTSHP09668 335 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 OR52Z1P0C646 297 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 ZSCAN22P10073 491 aaPredicted RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 NCLP19338 710 aaKnown RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 EN2P19622 333 aaPredicted RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 U2AF2P26368 475 aaKnown RBP eCLIP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 ICAM3P32942 547 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 CIITAP33076 1130 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 GJA8P48165 433 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 USP11P51784 963 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 GJA9P57773 515 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 RELBQ01201 579 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 NEDD9Q14511 834 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 LRRC41Q15345 812 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 ZNF174Q15697 407 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 CELF3Q5SZQ8 465 aaKnown RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 UTP14CQ5TAP6 766 aaKnown RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 CCDC62Q6P9F0 684 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 MOXD1Q6UVY6 613 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 METTL7BQ6UX53 244 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 ARRDC4Q8NCT1 418 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 GIMAP8Q8ND71 665 aaPredicted RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 PPTC7Q8NI37 304 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 FERMT2Q96AC1 680 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 LENG9Q96B70 501 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 FRMD6Q96NE9 622 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 TEKT3Q9BXF9 490 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 UPF3AQ9H1J1 476 aaKnown RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 ZFAND3Q9H8U3 227 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 SLC9A2Q9UBY0 812 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 DDX41Q9UJV9 622 aaKnown RBP7.21□□□□□ -1.26
VPS4B-205ENST00000591383 SAMM50Q9Y512 469 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 ARID2Q68CP9 1835 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 ELP1O95163 1332 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 WDR81Q562E7 1941 aa7.21□□□□□ -1.26
VPS4B-205ENST00000591383 MYH9P35579 1960 aaKnown RBP7.2□□□□□ -1.26
VPS4B-205ENST00000591383 A0A1W2PQ45 241 aaPredicted RBP7.2□□□□□ -1.26
VPS4B-205ENST00000591383 A0A1W2PQY0 241 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 MEIS1O00470 390 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 ZEB2O60315 1214 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 ATP9AO75110 1047 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 MICAL2O94851 1124 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 SGPL1O95470 568 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 F13A1P00488 732 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 TGFB3P10600 412 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 MARK3P27448 753 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 TRAPPC10P48553 1259 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 ACTR2P61160 394 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 KRT76Q01546 638 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 SP2Q02086 613 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 CEBPZQ03701 1054 aaKnown RBP7.2□□□□□ -1.26
VPS4B-205ENST00000591383 LAMC2Q13753 1193 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 DGKDQ16760 1214 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 Q4G0T1 1027 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 RILPL1Q5EBL4 403 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 FAM47CQ5HY64 1035 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 GNASQ5JWF2 1037 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 NCAPH2Q6IBW4 605 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 FAM173BQ6P4H8 233 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 CXCL17Q6UXB2 119 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 SLC43A3Q8NBI5 491 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 ETNPPLQ8TBG4 499 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 PPP1R13LQ8WUF5 828 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 FTOQ9C0B1 505 aaKnown RBP eCLIP7.2□□□□□ -1.26
VPS4B-205ENST00000591383 DNAJC25Q9H1X3 360 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 TMEM60Q9H2L4 133 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 BCAS3Q9H6U6 928 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 CCSER2Q9H7U1 834 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 FAM13BQ9NYF5 915 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 OGDHLQ9ULD0 1010 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 TELO2Q9Y4R8 837 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 PCDHB6Q9Y5E3 794 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 SCN10AQ9Y5Y9 1956 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 NFASCO94856 1347 aa7.2□□□□□ -1.26
VPS4B-205ENST00000591383 CYP3A7-CYP3A51PA0A087WV96 503 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 WDR64B1ANS9 1081 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 EDIL3O43854 480 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 BAG4O95429 457 aaKnown RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 CCNE2O96020 404 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms