RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 C1orf112Q9NSG2 853 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 BMP2KQ9NSY1 1161 aaPredicted RBP13.51□□□□□ -0.25
TPM4-212ENST00000590180 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.51□□□□□ -0.25
TPM4-212ENST00000590180 MTCH2Q9Y6C9 303 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 A0A087WZ62 844 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 CSDE1O75534 798 aaKnown RBP13.5□□□□□ -0.25
TPM4-212ENST00000590180 DGKIO75912 1065 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 OR52Z1P0C646 297 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 DARSP14868 501 aaKnown RBP13.5□□□□□ -0.25
TPM4-212ENST00000590180 POU3F3P20264 500 aaPredicted RBP13.5□□□□□ -0.25
TPM4-212ENST00000590180 FGFR4P22455 802 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 U2AF2P26368 475 aaKnown RBP eCLIP13.5□□□□□ -0.253e-8■□□□□ 9.8
TPM4-212ENST00000590180 RFC5P40937 340 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 TRAPPC10P48553 1259 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 SARSP49591 514 aaKnown RBP13.5□□□□□ -0.25
TPM4-212ENST00000590180 EPC2Q52LR7 807 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 SLC24A5Q71RS6 500 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 KSR1Q8IVT5 923 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 NEK9Q8TD19 979 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 CCDC43Q96MW1 224 aaKnown RBP13.5□□□□□ -0.25
TPM4-212ENST00000590180 SAMD11Q96NU1 681 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 FDXACB1Q9BRP7 624 aaPredicted RBP13.5□□□□□ -0.25
TPM4-212ENST00000590180 PRDM6Q9NQX0 595 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
TPM4-212ENST00000590180 PPME1Q9Y570 386 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 TTC3P53804 2025 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 PTPRSQ13332 1948 aa13.5□□□□□ -0.25
TPM4-212ENST00000590180 WDR81Q562E7 1941 aa13.49□□□□□ -0.25
TPM4-212ENST00000590180 POTEMA6NI47 508 aa13.49□□□□□ -0.25
TPM4-212ENST00000590180 LPXNO60711 386 aa13.49□□□□□ -0.25
TPM4-212ENST00000590180 SRGAP2CP0DJJ0 459 aa13.49□□□□□ -0.25
TPM4-212ENST00000590180 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
TPM4-212ENST00000590180 GPM6BQ13491 265 aa13.49□□□□□ -0.25
TPM4-212ENST00000590180 NBR1Q14596 966 aa13.49□□□□□ -0.25
TPM4-212ENST00000590180 PAN2Q504Q3 1202 aaKnown RBP13.49□□□□□ -0.25
TPM4-212ENST00000590180 LARP1BQ659C4 914 aaKnown RBP13.49□□□□□ -0.25
TPM4-212ENST00000590180 ERMNQ8TAM6 284 aa13.49□□□□□ -0.25
TPM4-212ENST00000590180 PRPF31Q8WWY3 499 aaKnown RBP13.49□□□□□ -0.25
TPM4-212ENST00000590180 ZNF689Q96CS4 500 aaPredicted RBP13.49□□□□□ -0.25
TPM4-212ENST00000590180 NLRP4Q96MN2 994 aa13.49□□□□□ -0.25
TPM4-212ENST00000590180 INO80BQ9C086 356 aaPredicted RBP13.49□□□□□ -0.25
TPM4-212ENST00000590180 DHX33Q9H6R0 707 aaKnown RBP13.49□□□□□ -0.25
TPM4-212ENST00000590180 LOXHD1Q8IVV2 1947 aa13.49□□□□□ -0.25
TPM4-212ENST00000590180 C9IYK1 514 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 LYPLA2O95372 231 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 CTNNB1P35222 781 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 BMPR1AP36894 532 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 GATMP50440 423 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 TOB1P50616 345 aaPredicted RBP13.48□□□□□ -0.25
TPM4-212ENST00000590180 PTGDRQ13258 359 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 DSC3Q14574 896 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 EMC2Q15006 297 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 SPOUT1Q5T280 376 aaKnown RBP13.48□□□□□ -0.25
TPM4-212ENST00000590180 FAM102BQ5T8I3 360 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 ZNF410Q86VK4 478 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 RNF169Q8NCN4 708 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 PIGOQ8TEQ8 1089 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 TCP11Q8WWU5 503 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 PSPC1Q8WXF1 523 aaKnown RBP13.48□□□□□ -0.25
TPM4-212ENST00000590180 MTRQ99707 1265 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 ATP6V0A4Q9HBG4 840 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 ANKEF1Q9NU02 776 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 LMCD1Q9NZU5 365 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 PCDHB6Q9Y5E3 794 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 COL4A3BPQ9Y5P4 624 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 CHD9Q3L8U1 2897 aa13.48□□□□□ -0.25
TPM4-212ENST00000590180 ADGRA3Q8IWK6 1321 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 TBKBP1A7MCY6 615 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 H3BNC9 293 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 ASAP2O43150 1006 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 RB1P06400 928 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
TPM4-212ENST00000590180 FAM189BP81408 668 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 LAMTOR4Q0VGL1 99 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 PTPROQ16827 1216 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 CATSPER4Q7RTX7 472 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 CATSPER3Q86XQ3 398 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 CMTR2Q8IYT2 770 aaKnown RBP13.47□□□□□ -0.25
TPM4-212ENST00000590180 CRIPAKQ8N1N5 446 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 C4orf32Q8N8J7 132 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 NACC1Q96RE7 527 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 TUFT1Q9NNX1 390 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 LRWD1Q9UFC0 647 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 RWDD3Q9Y3V2 267 aa13.47□□□□□ -0.25
TPM4-212ENST00000590180 SIP14410 1827 aa13.46□□□□□ -0.25
TPM4-212ENST00000590180 COL6A3P12111 3177 aa13.46□□□□□ -0.25
TPM4-212ENST00000590180 MYO7AQ13402 2215 aa13.46□□□□□ -0.25
TPM4-212ENST00000590180 GAS2O43903 313 aaKnown RBP13.46□□□□□ -0.25
TPM4-212ENST00000590180 MED24O75448 989 aa13.46□□□□□ -0.25
TPM4-212ENST00000590180 DGAT1O75907 488 aa13.46□□□□□ -0.25
TPM4-212ENST00000590180 SFPQP23246 707 aaKnown RBP eCLIP13.46□□□□□ -0.25
TPM4-212ENST00000590180 MAEAQ7L5Y9 396 aa13.46□□□□□ -0.25
TPM4-212ENST00000590180 FERMT3Q86UX7 667 aa13.46□□□□□ -0.25
TPM4-212ENST00000590180 POLR3CQ9BUI4 534 aaPredicted RBP13.46□□□□□ -0.25
TPM4-212ENST00000590180 ELAC1Q9H777 363 aaKnown RBP13.46□□□□□ -0.25
TPM4-212ENST00000590180 RC3H2Q9HBD1 1191 aaKnown RBP13.46□□□□□ -0.25
TPM4-212ENST00000590180 CHST12Q9NRB3 414 aa13.46□□□□□ -0.25
TPM4-212ENST00000590180 TMEM161AQ9NX61 479 aa13.46□□□□□ -0.25
TPM4-212ENST00000590180 DACT1Q9NYF0 836 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms