RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 NAB2Q15742 525 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 BMT2Q1RMZ1 405 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 KIAA0753Q2KHM9 967 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 HGSNATQ68CP4 663 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 PTCRAQ6ISU1 281 aaPredicted RBP8.09□□□□□ -1.11
ZNF540-206ENST00000589117 CCNI2Q6ZMN8 369 aaPredicted RBP8.09□□□□□ -1.11
ZNF540-206ENST00000589117 GBP6Q6ZN66 633 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 HS2ST1Q7LGA3 356 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 FAM160B2Q86V87 743 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 TSEN2Q8NCE0 465 aaKnown RBP8.09□□□□□ -1.11
ZNF540-206ENST00000589117 GLIS3Q8NEA6 775 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 SPATA4Q8NEY3 305 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 GOLGA5Q8TBA6 731 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 SP7Q8TDD2 431 aaPredicted RBP8.09□□□□□ -1.11
ZNF540-206ENST00000589117 COG1Q8WTW3 980 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 TAF4BQ92750 862 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 DRC1Q96MC2 740 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 NACC1Q96RE7 527 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 EIF2AK1Q9BQI3 630 aaKnown RBP8.09□□□□□ -1.11
ZNF540-206ENST00000589117 REEP2Q9BRK0 252 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 FBXL5Q9UKA1 691 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 NOD1Q9Y239 953 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 NRXN2Q9P2S2 1712 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 GREB1LQ9C091 1923 aaPredicted RBP8.09□□□□□ -1.11
ZNF540-206ENST00000589117 GTPBP10A4D1E9 387 aaKnown RBP8.09□□□□□ -1.11
ZNF540-206ENST00000589117 GRID2IPA4D2P6 1211 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 ERICH4A6NGS2 130 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 MEIS1O00470 390 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 PPIP5K2O43314 1243 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 GAS7O60861 476 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 CFBP00751 764 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 SEC13P55735 322 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 SETQ01105 290 aaPredicted RBP8.09□□□□□ -1.11
ZNF540-206ENST00000589117 DLGAP5Q15398 846 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 AOC3Q16853 763 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 LRCH2Q5VUJ6 765 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 TCERG1LQ5VWI1 586 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 ZNF772Q68DY9 489 aaPredicted RBP8.09□□□□□ -1.11
ZNF540-206ENST00000589117 SFR1Q86XK3 245 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 TBC1D5Q92609 795 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 ARHGAP9Q9BRR9 750 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 MLXIPQ9HAP2 919 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 FRMD4BQ9Y2L6 1034 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 TMX2Q9Y320 296 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 DAAM1Q9Y4D1 1078 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 PCDHGA11Q9Y5H2 935 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 CAPN6Q9Y6Q1 641 aa8.09□□□□□ -1.11
ZNF540-206ENST00000589117 SHTN1A0MZ66 631 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 BTNL10A8MVZ5 291 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 ZNF185O15231 689 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 PLA2G6O60733 806 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 NOL4O94818 638 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 TFRCP02786 760 aaKnown RBP8.08□□□□□ -1.12
ZNF540-206ENST00000589117 NR3C1P04150 777 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 HOXA13P31271 388 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-206ENST00000589117 PSMC2P35998 433 aaKnown RBP8.08□□□□□ -1.12
ZNF540-206ENST00000589117 LMAN1P49257 510 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 AARSP49588 968 aaKnown RBP eCLIP8.08□□□□□ -1.12
ZNF540-206ENST00000589117 ARID5AQ03989 594 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 PPP2R5CQ13362 524 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 SLC15A2Q16348 729 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 MAP7D1Q3KQU3 841 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 EPM2AIP1Q7L775 607 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-206ENST00000589117 TPH2Q8IWU9 490 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 IFT20Q8IY31 132 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 RTKN2Q8IZC4 609 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 MYCT1Q8N699 235 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 FAM151AQ8WW52 585 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 LENG9Q96B70 501 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 LRCH3Q96II8 777 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 SELENOOQ9BVL4 669 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 PARVGQ9HBI0 331 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 RNF19AQ9NV58 838 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 ADAMTS1Q9UHI8 967 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 GPSM3Q9Y4H4 160 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 MYH7BA7E2Y1 1941 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 ANKRD31Q8N7Z5 1873 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 UBE4BO95155 1302 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 CES2O00748 559 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 NKRFO15226 690 aaKnown RBP eCLIP8.08□□□□□ -1.12
ZNF540-206ENST00000589117 GFPT2O94808 682 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 IVLP07476 585 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 UCHL3P15374 230 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 EPHB4P54760 987 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 PSMC6P62333 389 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 CYP4A11Q02928 519 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 NFIL3Q16649 462 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 CEP55Q53EZ4 464 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 DCAF17Q5H9S7 520 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-206ENST00000589117 FKBP1CQ5VVH2 108 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 MSL1Q68DK7 614 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 C8orf74Q6P047 294 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 EMBQ6PCB8 327 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 OTOP1Q7RTM1 612 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 SPICE1Q8N0Z3 855 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 FAM133AQ8N9E0 248 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 NEK9Q8TD19 979 aa8.08□□□□□ -1.12
ZNF540-206ENST00000589117 PRMT6Q96LA8 375 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-206ENST00000589117 UIMC1Q96RL1 719 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms