RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 HCFC2Q9Y5Z7 792 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 MYH9P35579 1960 aaKnown RBP15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 KLF18A0A0U1RQI7 1052 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 C2orf71A6NGG8 1288 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 C2CD4DB7Z1M9 353 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 BRD1O95696 1058 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 HOXB8P17481 243 aaPredicted RBP15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 SP100P23497 879 aaPredicted RBP15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 ADD1P35611 737 aaKnown RBP15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 PPM1AP35813 382 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 GPC3P51654 580 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 NLRP11P59045 1033 aaKnown RBP15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 SKAP1Q86WV1 359 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 ZNF558Q96NG5 402 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 GLT8D2Q9H1C3 349 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 NGRNQ9NPE2 291 aaKnown RBP15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 ENTPD7Q9NQZ7 604 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 TBC1D22BQ9NU19 505 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 GABBR1Q9UBS5 961 aa15.64■□□□□ 0.09
CLPTM1-208ENST00000588274 A0A0U1RQF3 1178 aa15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 ST18O60284 1047 aa15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 DARSP14868 501 aaKnown RBP15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 EIF4BP23588 611 aaKnown RBP15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 ZNF76P36508 570 aa15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 IRX6P78412 446 aaPredicted RBP15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 DRP2Q13474 957 aa15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 TARBP2Q15633 366 aaKnown RBP15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 METTL13Q8N6R0 699 aa15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 MRPL43Q8N983 215 aaKnown RBP15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 BCL7CQ8WUZ0 217 aaPredicted RBP15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 ZNF668Q96K58 619 aaPredicted RBP15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 RIPOR3Q96MK2 946 aa15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 ADAM7Q9H2U9 754 aa15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 PCDHA10Q9Y5I2 948 aa15.63■□□□□ 0.09
CLPTM1-208ENST00000588274 MAGEB2O15479 319 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 HOXA2O43364 376 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 CLASP2O75122 1294 aaKnown RBP15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 STBD1O95210 358 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 OATP04181 439 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 PSAPP07602 524 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 SRGAP2BP0DMP2 458 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 FGFR4P22455 802 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 PRKCEQ02156 737 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 PRR16Q569H4 304 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 EFCAB12Q6NXP0 572 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 B3GNT9Q6UX72 402 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 SYNE3Q6ZMZ3 975 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 TRMT1LQ7Z2T5 733 aaKnown RBP15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 CKAP2LQ8IYA6 745 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 REXO1Q8N1G1 1221 aaKnown RBP15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 TMEM105Q8N8V8 129 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 KREMEN2Q8NCW0 462 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 VN1R3Q9BXE9 311 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 SPG21Q9NZD8 308 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 CEP131Q9UPN4 1083 aa15.62■□□□□ 0.09
CLPTM1-208ENST00000588274 PROB1E7EW31 1015 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 MSH4O15457 936 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 B4GALT3O60512 393 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 GFRA3O60609 400 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 CPA1P15085 419 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 SMC1AQ14683 1233 aaKnown RBP15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 BMP2KLQ5H9B9 411 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 HELQQ8TDG4 1101 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 CASP10Q92851 521 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 FAM167AQ96KS9 214 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 TRAIPQ9BWF2 469 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 ZBP1Q9H171 429 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 PUF60Q9UHX1 559 aaKnown RBP15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 AKT3Q9Y243 479 aa15.61■□□□□ 0.09
CLPTM1-208ENST00000588274 IGKV6-21A0A0C4DH24 114 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 MEIS3P2A8K0S8 358 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 WDR64B1ANS9 1081 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 GALR2O43603 387 aaPredicted RBP15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 CSDE1O75534 798 aaKnown RBP15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 WEE2P0C1S8 567 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 BCAR1P56945 870 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 ITIH3Q06033 890 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 MTMR3Q13615 1198 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 NTRK3Q16288 839 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 RNF20Q5VTR2 975 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 KANK3Q6NY19 840 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 TMC7Q7Z402 723 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 KCNB2Q92953 911 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 GJA10Q969M2 543 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 MAP7D2Q96T17 732 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 SORCS3Q9UPU3 1222 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 IRAK3Q9Y616 596 aa15.6■□□□□ 0.09
CLPTM1-208ENST00000588274 SPTBN4Q9H254 2564 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 TMEM150BA6NC51 233 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 NT5C1B-RDH14C9J2C7 533 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 H0Y858 1186 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 EOMESO95936 686 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 METAP2P50579 478 aaKnown RBP eCLIP15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 NUBP1P53384 320 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 KRT17Q04695 432 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 TPRNQ4KMQ1 711 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 KIAA1841Q6NSI8 718 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 ASCL5Q7RTU5 278 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 UBALD2Q8IYN6 164 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms