RNA–Protein interactions for RNA: ENST00000586275.1

PDE4A-205, Transcript of phosphodiesterase 4A, humanhuman

TSL 3

Gene PDE4A, Length 695 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-205ENST00000586275 CSPG5O95196 566 aa23.65■■□□□ 1.38
PDE4A-205ENST00000586275 IL9P15248 144 aa23.65■■□□□ 1.38
PDE4A-205ENST00000586275 PPP2R5CQ13362 524 aa23.65■■□□□ 1.38
PDE4A-205ENST00000586275 ME3Q16798 604 aa23.65■■□□□ 1.38
PDE4A-205ENST00000586275 SPOUT1Q5T280 376 aaKnown RBP23.65■■□□□ 1.38
PDE4A-205ENST00000586275 NECAB1Q8N987 351 aa23.65■■□□□ 1.38
PDE4A-205ENST00000586275 NLRP7Q8WX94 980 aa23.65■■□□□ 1.38
PDE4A-205ENST00000586275 C1QTNF1Q9BXJ1 281 aa23.65■■□□□ 1.38
PDE4A-205ENST00000586275 AAASQ9NRG9 546 aa23.65■■□□□ 1.38
PDE4A-205ENST00000586275 TYW1Q9NV66 732 aaKnown RBP23.65■■□□□ 1.38
PDE4A-205ENST00000586275 VAV3Q9UKW4 847 aa23.65■■□□□ 1.38
PDE4A-205ENST00000586275 NLRC5Q86WI3 1866 aa23.64■■□□□ 1.38
PDE4A-205ENST00000586275 EML1O00423 815 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 TBX3O15119 743 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 CCNT1O60563 726 aaKnown RBP23.64■■□□□ 1.37
PDE4A-205ENST00000586275 FGFR1P11362 822 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 FDPSP14324 419 aaKnown RBP23.64■■□□□ 1.37
PDE4A-205ENST00000586275 LTBRP36941 435 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 DRP2Q13474 957 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 POF1BQ8WVV4 589 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 GTF3C6Q969F1 213 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 PPP2R3CQ969Q6 453 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 SH2D3AQ9BRG2 576 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 IGFLR1Q9H665 355 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 CD320Q9NPF0 282 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 FAM50BQ9Y247 325 aa23.64■■□□□ 1.37
PDE4A-205ENST00000586275 HOXA2O43364 376 aa23.63■■□□□ 1.37
PDE4A-205ENST00000586275 MAFO75444 373 aaPredicted RBP23.63■■□□□ 1.37
PDE4A-205ENST00000586275 QARSP47897 775 aaKnown RBP23.63■■□□□ 1.37
PDE4A-205ENST00000586275 ANO5Q75V66 913 aa23.63■■□□□ 1.37
PDE4A-205ENST00000586275 TMEM117Q9H0C3 514 aa23.63■■□□□ 1.37
PDE4A-205ENST00000586275 MARCH6O60337 910 aa23.62■■□□□ 1.37
PDE4A-205ENST00000586275 DKC1O60832 514 aaKnown RBP eCLIP23.62■■□□□ 1.374e-7■■■■■ 32.2
PDE4A-205ENST00000586275 LARGE1O95461 756 aa23.62■■□□□ 1.37
PDE4A-205ENST00000586275 GTF2F1P35269 517 aaKnown RBP eCLIP23.62■■□□□ 1.37
PDE4A-205ENST00000586275 KRT2P35908 639 aa23.62■■□□□ 1.37
PDE4A-205ENST00000586275 NEK4P51957 841 aa23.62■■□□□ 1.37
PDE4A-205ENST00000586275 CSPP1Q1MSJ5 1256 aa23.62■■□□□ 1.37
PDE4A-205ENST00000586275 EARS2Q5JPH6 523 aaKnown RBP23.62■■□□□ 1.37
PDE4A-205ENST00000586275 GJD3Q8N144 294 aa23.62■■□□□ 1.37
PDE4A-205ENST00000586275 HAS1Q92839 578 aa23.62■■□□□ 1.37
PDE4A-205ENST00000586275 GCOM2Q9BZD3 368 aaPredicted RBP23.62■■□□□ 1.37
PDE4A-205ENST00000586275 EPHX3Q9H6B9 360 aa23.62■■□□□ 1.37
PDE4A-205ENST00000586275 BRMS1Q9HCU9 246 aa23.62■■□□□ 1.37
PDE4A-205ENST00000586275 SUCLA2Q9P2R7 463 aaPredicted RBP23.62■■□□□ 1.37
PDE4A-205ENST00000586275 MYH9P35579 1960 aaKnown RBP23.61■■□□□ 1.37
PDE4A-205ENST00000586275 P4HBP07237 508 aaKnown RBP23.61■■□□□ 1.37
PDE4A-205ENST00000586275 FGFR4P22455 802 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 IRS1P35568 1242 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 UBE3AQ05086 875 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 ADAM15Q13444 863 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 ECHDC2Q86YB7 292 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 COLGALT1Q8NBJ5 622 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 CASD1Q96PB1 797 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 JPH2Q9BR39 696 aaPredicted RBP23.61■■□□□ 1.37
PDE4A-205ENST00000586275 CWH43Q9H720 699 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 CYP26B1Q9NR63 512 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 HCSTQ9UBK5 93 aa23.61■■□□□ 1.37
PDE4A-205ENST00000586275 A0A0U1RQF3 1178 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 CSDE1O75534 798 aaKnown RBP23.6■■□□□ 1.37
PDE4A-205ENST00000586275 FGF18O76093 207 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 LAG3P18627 525 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 COL9A1P20849 921 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 DLX2Q07687 328 aaPredicted RBP23.6■■□□□ 1.37
PDE4A-205ENST00000586275 NR5A1Q13285 461 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 ADGRD2Q7Z7M1 963 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 ZNF410Q86VK4 478 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 POTEDQ86YR6 584 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 THNSL1Q8IYQ7 743 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 NSUN7Q8NE18 718 aaKnown RBP23.6■■□□□ 1.37
PDE4A-205ENST00000586275 TNFRSF25Q93038 417 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 CHST12Q9NRB3 414 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 RNF19AQ9NV58 838 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 DACT1Q9NYF0 836 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 EVPLQ92817 2033 aa23.6■■□□□ 1.37
PDE4A-205ENST00000586275 LOXHD1Q8IVV2 1947 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 A0A087WZ62 844 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 FAM205CA6NFA0 338 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 LINC01565O15544 149 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 BAG4O95429 457 aaKnown RBP23.59■■□□□ 1.37
PDE4A-205ENST00000586275 EOMESO95936 686 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 SSTR3P32745 418 aaPredicted RBP23.59■■□□□ 1.37
PDE4A-205ENST00000586275 EPHA7Q15375 998 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 PLA2G4FQ68DD2 849 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 RHPN2Q8IUC4 686 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 SLFN12Q8IYM2 578 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 ABI1Q8IZP0 508 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 RNF169Q8NCN4 708 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 MICAL1Q8TDZ2 1067 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 KHSRPQ92945 711 aaKnown RBP eCLIP23.59■■□□□ 1.37
PDE4A-205ENST00000586275 FDXACB1Q9BRP7 624 aaPredicted RBP23.59■■□□□ 1.37
PDE4A-205ENST00000586275 INO80BQ9C086 356 aaPredicted RBP23.59■■□□□ 1.37
PDE4A-205ENST00000586275 PPME1Q9Y570 386 aa23.59■■□□□ 1.37
PDE4A-205ENST00000586275 TBX10O75333 385 aa23.58■■□□□ 1.37
PDE4A-205ENST00000586275 SFPQP23246 707 aaKnown RBP eCLIP23.58■■□□□ 1.37
PDE4A-205ENST00000586275 NPEPPSP55786 919 aa23.58■■□□□ 1.37
PDE4A-205ENST00000586275 LRRC55Q6ZSA7 311 aa23.58■■□□□ 1.37
PDE4A-205ENST00000586275 EXOC8Q8IYI6 725 aa23.58■■□□□ 1.37
PDE4A-205ENST00000586275 EFHBQ8N7U6 833 aa23.58■■□□□ 1.37
PDE4A-205ENST00000586275 SLC7A3Q8WY07 619 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms