RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	STAT5B	P51692	787 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	EPHB4	P54760	987 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	MOGS	Q13724	837 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	USP10	Q14694	798 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ACAP1	Q15027	740 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ZMAT1	Q5H9K5	638 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ZNF585A	Q6P3V2	769 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	OTOP1	Q7RTM1	612 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PASD1	Q8IV76	773 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CHST14	Q8NCH0	376 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SAMD11	Q96NU1	681 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	BOC	Q9BWV1	1114 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	BTBD2	Q9BX70	525 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PUS7L	Q9H0K6	701 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	OR10A5	Q9H207	317 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	FAM83G	A6ND36	823 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	HMGCR	P04035	888 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	RGS3	P49796	1198 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	MAP3K12	Q12852	859 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	STIL	Q15468	1287 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ZNF174	Q15697	407 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	KANK2	Q63ZY3	851 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	TAX1BP1	Q86VP1	789 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CIR1	Q86X95	450 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SPATS2	Q86XZ4	545 aa	Known RBP	4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	WDR66	Q8TBY9	1149 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	WWC2-AS2	Q96NR7	200 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	LMF1	Q96S06	567 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	GPR20	Q99678	358 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	DPYSL5	Q9BPU6	564 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	KRTAP3-1	Q9BYR8	98 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ZDHHC5	Q9C0B5	715 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PCIF1	Q9H4Z3	704 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SPEF1	Q9Y4P9	236 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	IFT140	Q96RY7	1462 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PRDM2	Q13029	1718 aa		4.92	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ZNF891	A8MT65	544 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CBX4	O00257	560 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	MAFG	O15525	162 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	FOXS1	O43638	330 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	F2	P00734	622 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PDGFRB	P09619	1106 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SDHA	P31040	664 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ADAM17	P78536	824 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SLC6A3	Q01959	620 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PCOLCE	Q15113	449 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	HS1BP3	Q53T59	392 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SLFN13	Q68D06	897 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	KIAA1958	Q8N8K9	716 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	NEIL1	Q96FI4	390 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ELF4	Q99607	663 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	MTFR1L	Q9H019	292 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	B4GALT6	Q9UBX8	382 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	FAM184B	Q9ULE4	1060 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ASB1	Q9Y576	335 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SLC4A7	Q9Y6M7	1214 aa		4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754	EIF4G3	O43432	1585 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-229	ENST00000584754		A0A0G2JNJ9	132 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MATN2	O00339	956 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	RAB11FIP3	O75154	756 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ATP2A2	P16615	1042 aa	Known RBP	4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ZNF20	P17024	532 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	BPI	P17213	487 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ETV4	P43268	484 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	LSS	P48449	732 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MEOX1	P50221	254 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ANTXR2	P58335	489 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	IL2	P60568	153 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	STRN3	Q13033	797 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CREB3L3	Q68CJ9	461 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TCTN3	Q6NUS6	607 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	NME9	Q86XW9	330 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	PALM2	Q8IXS6	379 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ZZZ3	Q8IYH5	903 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TTC9B	Q8N6N2	239 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	OR14K1	Q8NGZ2	314 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CCDC136	Q96JN2	1154 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	C12orf65	Q9H3J6	166 aa	Known RBP	4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	DEF6	Q9H4E7	631 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SEC61A2	Q9H9S3	476 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CD248	Q9HCU0	757 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ACSS2	Q9NR19	701 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	OXSM	Q9NWU1	459 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754		Q9UFV3	132 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	NR2E1	Q9Y466	385 aa		4.9	□□□□□ -1.63
PPP4R1-229	ENST00000584754	RSF1	Q96T23	1441 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	LCHN	A4D1U4	455 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754		H7C1D1	291 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	GPR39	O43194	453 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CYP17A1	P05093	508 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MRE11	P49959	708 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	KPNA1	P52294	538 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	RAC3	P60763	192 aa		4.89	□□□□□ -1.63

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