RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 LBX1P52954 281 aa20.05■□□□□ 0.8
NDEL1-217ENST00000583683 RTP1P59025 263 aa20.05■□□□□ 0.8
NDEL1-217ENST00000583683 IGBP1P78318 339 aa20.05■□□□□ 0.8
NDEL1-217ENST00000583683 PPFIA1Q13136 1202 aa20.05■□□□□ 0.8
NDEL1-217ENST00000583683 STIM1Q13586 685 aa20.05■□□□□ 0.8
NDEL1-217ENST00000583683 EPM2AIP1Q7L775 607 aaPredicted RBP20.05■□□□□ 0.8
NDEL1-217ENST00000583683 AOPEPQ8N6M6 819 aa20.05■□□□□ 0.8
NDEL1-217ENST00000583683 SCFD1Q8WVM8 642 aa20.05■□□□□ 0.8
NDEL1-217ENST00000583683 KATNAL1Q9BW62 490 aa20.05■□□□□ 0.8
NDEL1-217ENST00000583683 POLR3FQ9H1D9 316 aaPredicted RBP20.05■□□□□ 0.8
NDEL1-217ENST00000583683 CTNND2Q9UQB3 1225 aa20.05■□□□□ 0.8
NDEL1-217ENST00000583683 PSMA7O14818 248 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 GAS2O43903 313 aaKnown RBP20.04■□□□□ 0.8
NDEL1-217ENST00000583683 ZEB2O60315 1214 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 MYBP10242 640 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 NMT1P30419 496 aaKnown RBP20.04■□□□□ 0.8
NDEL1-217ENST00000583683 ARL2P36404 184 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 PPP1R2P41236 205 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 PEX3P56589 373 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 CHMP4BP1P59074 171 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 PAK1Q13153 545 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 MKRN4PQ13434 485 aaPredicted RBP20.04■□□□□ 0.8
NDEL1-217ENST00000583683 DRP2Q13474 957 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 GRIK4Q16099 956 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 MARCH8Q5T0T0 291 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 CXCL17Q6UXB2 119 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 ZNF720Q7Z2F6 126 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 MYOCDQ8IZQ8 938 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 BSNDQ8WZ55 320 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 ZBTB10Q96DT7 871 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 DHTKD1Q96HY7 919 aaPredicted RBP20.04■□□□□ 0.8
NDEL1-217ENST00000583683 MTG1Q9BT17 334 aaPredicted RBP20.04■□□□□ 0.8
NDEL1-217ENST00000583683 GCNT3O95395 438 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 SMIM10L2AP0DMW4 78 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 SMIM10L2BP0DMW5 78 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 KLRC1P26715 233 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 NCAPHQ15003 741 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 KCNA10Q16322 511 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 CTU1Q7Z7A3 348 aaKnown RBP20.04■□□□□ 0.8
NDEL1-217ENST00000583683 LRRC71Q8N4P6 559 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 NELFBQ8WX92 580 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 JPH2Q9BR39 696 aaPredicted RBP20.04■□□□□ 0.8
NDEL1-217ENST00000583683 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.04■□□□□ 0.8
NDEL1-217ENST00000583683 SUGCTQ9HAC7 445 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 GRPEL1Q9HAV7 217 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 RWDD2AQ9UIY3 292 aa20.04■□□□□ 0.8
NDEL1-217ENST00000583683 NRCAMQ92823 1304 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 BECN2A8MW95 431 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 IKBKBO14920 756 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 ASGR1P07306 291 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 MAPTP10636 758 aaKnown RBP20.03■□□□□ 0.8
NDEL1-217ENST00000583683 NPTX2P47972 431 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 CTCFP49711 727 aaPredicted RBP20.03■□□□□ 0.8
NDEL1-217ENST00000583683 PMS1P54277 932 aaKnown RBP20.03■□□□□ 0.8
NDEL1-217ENST00000583683 STX17P56962 302 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 MYL5Q02045 173 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 DMP1Q13316 513 aaPredicted RBP20.03■□□□□ 0.8
NDEL1-217ENST00000583683 RNF180Q86T96 592 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 ENOX1Q8TC92 643 aaKnown RBP20.03■□□□□ 0.8
NDEL1-217ENST00000583683 PPP1R13LQ8WUF5 828 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 LMBR1Q8WVP7 490 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 NTPCRQ9BSD7 190 aaKnown RBP20.03■□□□□ 0.8
NDEL1-217ENST00000583683 STRA6Q9BX79 667 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 UNC93B1Q9H1C4 597 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 SETD4Q9NVD3 440 aa20.03■□□□□ 0.8
NDEL1-217ENST00000583683 TRIP12Q14669 1992 aaPredicted RBP20.03■□□□□ 0.8
NDEL1-217ENST00000583683 MAGEB2O15479 319 aa20.02■□□□□ 0.8
NDEL1-217ENST00000583683 PPP1R37O75864 691 aa20.02■□□□□ 0.8
NDEL1-217ENST00000583683 MYCNP04198 464 aaPredicted RBP20.02■□□□□ 0.8
NDEL1-217ENST00000583683 GLRA2P23416 452 aa20.02■□□□□ 0.8
NDEL1-217ENST00000583683 NCKAP1LP55160 1127 aa20.02■□□□□ 0.8
NDEL1-217ENST00000583683 ZC2HC1CQ53FD0 456 aaPredicted RBP20.02■□□□□ 0.8
NDEL1-217ENST00000583683 IER5Q5VY09 327 aa20.02■□□□□ 0.8
NDEL1-217ENST00000583683 CENPPQ6IPU0 288 aa20.02■□□□□ 0.8
NDEL1-217ENST00000583683 EFCAB12Q6NXP0 572 aa20.02■□□□□ 0.8
NDEL1-217ENST00000583683 MTHFD1LQ6UB35 978 aa20.02■□□□□ 0.8
NDEL1-217ENST00000583683 PCSK9Q8NBP7 692 aaKnown RBP20.02■□□□□ 0.8
NDEL1-217ENST00000583683 SPIRE2Q8WWL2 714 aa20.02■□□□□ 0.8
NDEL1-217ENST00000583683 RRN3P2A6NIE6 340 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 EIF3DO15371 548 aaKnown RBP eCLIP20.02■□□□□ 0.79
NDEL1-217ENST00000583683 HOXD13P35453 343 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 MTFR1Q15390 333 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 BMT2Q1RMZ1 405 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 METTL13Q8N6R0 699 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 RETREG2Q8NC44 543 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 ZNF507Q8TCN5 953 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 ASAP3Q8TDY4 903 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 TCP11Q8WWU5 503 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 IFT74Q96LB3 600 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 SEMA6BQ9H3T3 888 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 ST6GALNAC4Q9H4F1 302 aa20.02■□□□□ 0.79
NDEL1-217ENST00000583683 PAK6Q9NQU5 681 aaPredicted RBP20.02■□□□□ 0.79
NDEL1-217ENST00000583683 TRIM49BA6NDI0 452 aa20.01■□□□□ 0.79
NDEL1-217ENST00000583683 CCDC169A6NNP5 214 aa20.01■□□□□ 0.79
NDEL1-217ENST00000583683 K7ENM7 598 aa20.01■□□□□ 0.79
NDEL1-217ENST00000583683 SLC16A4O15374 487 aa20.01■□□□□ 0.79
NDEL1-217ENST00000583683 PRPF6O94906 941 aaKnown RBP20.01■□□□□ 0.79
NDEL1-217ENST00000583683 KIF20AO95235 890 aa20.01■□□□□ 0.79
NDEL1-217ENST00000583683 CCNE1P24864 410 aa20.01■□□□□ 0.79
NDEL1-217ENST00000583683 KCNA1Q09470 495 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms