RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ZCCHC14Q8WYQ9 949 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 MTG2Q9H4K7 406 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 AASDHPPTQ9NRN7 309 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 CCM2LQ9NUG4 571 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 DNAJC28Q9NX36 388 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 CDC42EP3Q9UKI2 254 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 MYPNQ86TC9 1320 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 A0A1B0GTL3 188 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 COL6A1P12109 1028 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 BCAR1P56945 870 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 SRSF2Q01130 221 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 DLX2Q07687 328 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 NFATC3Q12968 1075 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 VMACQ2NL98 169 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 ZNF385BQ569K4 471 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 PRR31Q5SQ13 230 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 OTOP2Q7RTS6 562 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 SAPCD2Q86UD0 394 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 KCTD10Q9H3F6 313 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 L2HGDHQ9H9P8 463 aa7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 METTL14Q9HCE5 456 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-219ENST00000583294 XPOTO43592 962 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 CFBP00751 764 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 INHBBP09529 407 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 RPL13P26373 211 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 LGALS4P56470 323 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 TRIM25Q14258 630 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 ACAP2Q15057 778 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 VWA3BQ502W6 1294 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 GRAMD4Q6IC98 578 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 CXXC5Q7LFL8 322 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 PNMA8AQ86V59 439 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 CHMP4CQ96CF2 233 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 HOOK2Q96ED9 719 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 NOL10Q9BSC4 688 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 NTMQ9P121 344 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 FTSJ1Q9UET6 329 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 TMPRSS11EQ9UL52 423 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 DENND2AQ9ULE3 1009 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 SPEF1Q9Y4P9 236 aa7.49□□□□□ -1.21
SMARCE1-219ENST00000583294 FZD9O00144 591 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 FFAR3O14843 346 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 OPHN1O60890 802 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 PFKMP08237 780 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 CELA3BP08861 270 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 RBP3P10745 1247 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 OSMP13725 252 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 ZNF28P17035 718 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 AFF3P51826 1226 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 ANTXR2P58335 489 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 MCL1Q07820 350 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 PPARAQ07869 468 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 NUDT10Q8NFP7 164 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 OR5AN1Q8NGI8 311 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 DACT3Q96B18 629 aaPredicted RBP7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 NUDT11Q96G61 164 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 SLC2A13Q96QE2 648 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 ORAI2Q96SN7 254 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 SPATA25Q9BR10 227 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 KCMF1Q9P0J7 381 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 DPP7Q9UHL4 492 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 EID1Q9Y6B2 187 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 NUMBLQ9Y6R0 609 aa7.48□□□□□ -1.21
SMARCE1-219ENST00000583294 A0A0A6YYJ9 748 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 PCDHGA12O60330 932 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 CHGBP05060 677 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 SARSP49591 514 aaKnown RBP7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 RAB27AP51159 221 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 KCNQ1P51787 676 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 CCT2P78371 535 aaKnown RBP7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 CDK17Q00537 523 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 DGKDQ16760 1214 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 MCTP2Q6DN12 878 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 LYSMD2Q8IV50 215 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 PITHD1Q9GZP4 211 aaPredicted RBP7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 WNT8AQ9H1J5 351 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 PCDHB6Q9Y5E3 794 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 PCDHGA9Q9Y5G4 932 aaKnown RBP7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 PCDHGA8Q9Y5G5 932 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 PCDHGA7Q9Y5G6 932 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 PCDHGA6Q9Y5G7 932 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 PCDHGA3Q9Y5H0 932 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 PCDHGA2Q9Y5H1 932 aa7.47□□□□□ -1.21
SMARCE1-219ENST00000583294 A0A0G2JNJ9 132 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 TRIM75PA6NK02 468 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 MAFGO15525 162 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 KLHL18O94889 574 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 CYP1A1P04798 512 aaPredicted RBP7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 EPHB1P54762 984 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 MAP3K12Q12852 859 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 ODF1Q14990 250 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 GAB3Q8WWW8 586 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 DYDC2Q96IM9 177 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 RAX2Q96IS3 184 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 SAE1Q9UBE0 346 aaPredicted RBP7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 Q9UFV3 132 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 PRSS50Q9UI38 385 aa7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 LUC7L2Q9Y383 392 aaKnown RBP7.46□□□□□ -1.22
SMARCE1-219ENST00000583294 MRFAP1Q9Y605 127 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms