RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ST18O60284 1047 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 GFRA3O60609 400 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 PSAPP07602 524 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 HOXB8P17481 243 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-221ENST00000583080 FGFR4P22455 802 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 SETQ01105 290 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-221ENST00000583080 PFKFB3Q16875 520 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-221ENST00000583080 EFCAB12Q6NXP0 572 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 DHX32Q7L7V1 743 aaKnown RBP18.3■□□□□ 0.52
SREBF1-221ENST00000583080 TMC7Q7Z402 723 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-221ENST00000583080 ABI1Q8IZP0 508 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 SLC39A11Q8N1S5 342 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 SNX27Q96L92 541 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 TBC1D22BQ9NU19 505 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 SPG21Q9NZD8 308 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 PCDHA10Q9Y5I2 948 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 ZFHX2Q9C0A1 2572 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-221ENST00000583080 C2orf71A6NGG8 1288 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 ZNF862O60290 1169 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 WEE2P0C1S8 567 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 EIF4BP23588 611 aaKnown RBP18.29■□□□□ 0.52
SREBF1-221ENST00000583080 PRR16Q569H4 304 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 RNF20Q5VTR2 975 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 HELQQ8TDG4 1101 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 CASP10Q92851 521 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 ATOH1Q92858 354 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-221ENST00000583080 LENG9Q96B70 501 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 RIPOR3Q96MK2 946 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 TCEAL9Q9UHQ7 104 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 CEP131Q9UPN4 1083 aa18.29■□□□□ 0.52
SREBF1-221ENST00000583080 ESYT2A0FGR8 921 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 H0Y858 1186 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 MAGEB2O15479 319 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
SREBF1-221ENST00000583080 BRD1O95696 1058 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 OATP04181 439 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 ZSCAN20P17040 1043 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-221ENST00000583080 ADD1P35611 737 aaKnown RBP18.28■□□□□ 0.52
SREBF1-221ENST00000583080 METAP2P50579 478 aaKnown RBP eCLIP18.28■□□□□ 0.52
SREBF1-221ENST00000583080 GPC3P51654 580 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 PRKCEQ02156 737 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 KRT17Q04695 432 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 SMC1AQ14683 1233 aaKnown RBP18.28■□□□□ 0.52
SREBF1-221ENST00000583080 UGCGQ16739 394 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 ZNF598Q86UK7 904 aaKnown RBP18.28■□□□□ 0.52
SREBF1-221ENST00000583080 SKAP1Q86WV1 359 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 REXO1Q8N1G1 1221 aaKnown RBP18.28■□□□□ 0.52
SREBF1-221ENST00000583080 FAM167AQ96KS9 214 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 ZMYND12Q9H0C1 365 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 NAP1L2Q9ULW6 460 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-221ENST00000583080 SAMM50Q9Y512 469 aa18.28■□□□□ 0.52
SREBF1-221ENST00000583080 NT5C1B-RDH14C9J2C7 533 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 CSDE1O75534 798 aaKnown RBP18.27■□□□□ 0.52
SREBF1-221ENST00000583080 DARSP14868 501 aaKnown RBP18.27■□□□□ 0.52
SREBF1-221ENST00000583080 CA8P35219 290 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 MTMR3Q13615 1198 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 TPRNQ4KMQ1 711 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 TMEM173Q86WV6 379 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-221ENST00000583080 MRPL43Q8N983 215 aaKnown RBP18.27■□□□□ 0.52
SREBF1-221ENST00000583080 FEZF2Q8TBJ5 459 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 SCLT1Q96NL6 688 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 ADAM7Q9H2U9 754 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 SORCS3Q9UPU3 1222 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 NR2E1Q9Y466 385 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 CFAP54Q96N23 3096 aa18.27■□□□□ 0.52
SREBF1-221ENST00000583080 A0A0U1RQF3 1178 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 WDR64B1ANS9 1081 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 EDIL3O43854 480 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 ASGR2P07307 311 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 CPA1P15085 419 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 RCAN1P53805 252 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 DRP2Q13474 957 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 RARS2Q5T160 578 aaKnown RBP18.26■□□□□ 0.51
SREBF1-221ENST00000583080 KANK3Q6NY19 840 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 C12orf76Q8N812 135 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-221ENST00000583080 TMEM105Q8N8V8 129 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 AUTS2Q8WXX7 1259 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 GJA10Q969M2 543 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 C6orf50Q9HD87 102 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 DISC1Q9NRI5 854 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 MYO10Q9HD67 2058 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 MYO15AQ9UKN7 3530 aa18.26■□□□□ 0.51
SREBF1-221ENST00000583080 GALR2O43603 387 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-221ENST00000583080 CHMP2AO43633 222 aa18.25■□□□□ 0.51
SREBF1-221ENST00000583080 TMOD1P28289 359 aa18.25■□□□□ 0.51
SREBF1-221ENST00000583080 CIITAP33076 1130 aa18.25■□□□□ 0.51
SREBF1-221ENST00000583080 BCAR1P56945 870 aa18.25■□□□□ 0.51
SREBF1-221ENST00000583080 ITIH3Q06033 890 aa18.25■□□□□ 0.51
SREBF1-221ENST00000583080 CES5AQ6NT32 575 aa18.25■□□□□ 0.51
SREBF1-221ENST00000583080 NECTIN4Q96NY8 510 aa18.25■□□□□ 0.51
SREBF1-221ENST00000583080 ZBP1Q9H171 429 aa18.25■□□□□ 0.51
SREBF1-221ENST00000583080 DENND4AQ7Z401 1863 aa18.24■□□□□ 0.51
SREBF1-221ENST00000583080 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-221ENST00000583080 TMEM150BA6NC51 233 aa18.24■□□□□ 0.51
SREBF1-221ENST00000583080 MSH4O15457 936 aa18.24■□□□□ 0.51
SREBF1-221ENST00000583080 EPCAMP16422 314 aa18.24■□□□□ 0.51
SREBF1-221ENST00000583080 TSGA10IPQ3SY00 556 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms