RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ABI1Q8IZP0 508 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 ZNF710Q8N1W2 664 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 LINC01465Q8N7H1 131 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 CASP10Q92851 521 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 TCEANC2Q96MN5 208 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 IRF2BPLQ9H1B7 796 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 ADAMTS10Q9H324 1103 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 FAM217BQ9NTX9 383 aaPredicted RBP15.36■□□□□ 0.05
SS18-222ENST00000582792 SPG21Q9NZD8 308 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 TCEAL9Q9UHQ7 104 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 AKT3Q9Y243 479 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 NR2E1Q9Y466 385 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 PCDHA10Q9Y5I2 948 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 ESYT2A0FGR8 921 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 SP100P23497 879 aaPredicted RBP15.35■□□□□ 0.05
SS18-222ENST00000582792 EIF4BP23588 611 aaKnown RBP15.35■□□□□ 0.05
SS18-222ENST00000582792 TMOD1P28289 359 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 CDC27P30260 824 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 RCAN1P53805 252 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 PFKFB3Q16875 520 aaPredicted RBP15.35■□□□□ 0.05
SS18-222ENST00000582792 TPRNQ4KMQ1 711 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 MCTP2Q6DN12 878 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 EFCAB12Q6NXP0 572 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 MRPL43Q8N983 215 aaKnown RBP15.35■□□□□ 0.05
SS18-222ENST00000582792 FAM167AQ96KS9 214 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 RIPOR3Q96MK2 946 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 MAP7D2Q96T17 732 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 ZMYND12Q9H0C1 365 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 FAM86C1Q9NVL1 165 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 GABBR1Q9UBS5 961 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 MYO15AQ9UKN7 3530 aa15.35■□□□□ 0.05
SS18-222ENST00000582792 KLF18A0A0U1RQI7 1052 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 ADAMTS3O15072 1205 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 GFRA3O60609 400 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 PDGFBP01127 241 aaPredicted RBP15.34■□□□□ 0.05
SS18-222ENST00000582792 NUBP1P53384 320 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 ITIH3Q06033 890 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 SMC1AQ14683 1233 aaKnown RBP15.34■□□□□ 0.05
SS18-222ENST00000582792 CLLU1OSQ5K130 101 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 CES5AQ6NT32 575 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 SLC39A11Q8N1S5 342 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 LRRC71Q8N4P6 559 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 KREMEN2Q8NCW0 462 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 SNX27Q96L92 541 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 NECTIN4Q96NY8 510 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 ADAM7Q9H2U9 754 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 POMKQ9H5K3 350 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 TSHZ2Q9NRE2 1034 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 CDH22Q9UJ99 828 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 HCFC2Q9Y5Z7 792 aa15.34■□□□□ 0.05
SS18-222ENST00000582792 WDR81Q562E7 1941 aa15.33■□□□□ 0.05
SS18-222ENST00000582792 WDR87Q6ZQQ6 2873 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 A0A0U1RQF3 1178 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 C2orf71A6NGG8 1288 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 EOMESO95936 686 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 DARSP14868 501 aaKnown RBP15.33■□□□□ 0.04
SS18-222ENST00000582792 CIITAP33076 1130 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 ADD1P35611 737 aaKnown RBP15.33■□□□□ 0.04
SS18-222ENST00000582792 MTMR3Q13615 1198 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 ADCK5Q3MIX3 580 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 TSGA10IPQ3SY00 556 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 PRR16Q569H4 304 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 ZNF598Q86UK7 904 aaKnown RBP15.33■□□□□ 0.04
SS18-222ENST00000582792 UBALD2Q8IYN6 164 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 REXO1Q8N1G1 1221 aaKnown RBP15.33■□□□□ 0.04
SS18-222ENST00000582792 RNF169Q8NCN4 708 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 ATOH1Q92858 354 aaPredicted RBP15.33■□□□□ 0.04
SS18-222ENST00000582792 C6orf50Q9HD87 102 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 SORCS3Q9UPU3 1222 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 SAMM50Q9Y512 469 aa15.33■□□□□ 0.04
SS18-222ENST00000582792 WDR64B1ANS9 1081 aa15.32■□□□□ 0.04
SS18-222ENST00000582792 C2CD4DB7Z1M9 353 aa15.32■□□□□ 0.04
SS18-222ENST00000582792 ZNF862O60290 1169 aa15.32■□□□□ 0.04
SS18-222ENST00000582792 CLASP2O75122 1294 aaKnown RBP15.32■□□□□ 0.04
SS18-222ENST00000582792 OATP04181 439 aa15.32■□□□□ 0.04
SS18-222ENST00000582792 GPC3P51654 580 aa15.32■□□□□ 0.04
SS18-222ENST00000582792 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
SS18-222ENST00000582792 HELQQ8TDG4 1101 aa15.32■□□□□ 0.04
SS18-222ENST00000582792 CCDC12Q8WUD4 166 aaPredicted RBP15.32■□□□□ 0.04
SS18-222ENST00000582792 LENG9Q96B70 501 aa15.32■□□□□ 0.04
SS18-222ENST00000582792 ZNF668Q96K58 619 aaPredicted RBP15.32■□□□□ 0.04
SS18-222ENST00000582792 MRPL9Q9BYD2 267 aaKnown RBP15.32■□□□□ 0.04
SS18-222ENST00000582792 NRBP2Q9NSY0 501 aa15.32■□□□□ 0.04
SS18-222ENST00000582792 CCDC196A0A1B0GTZ2 297 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 H0Y858 1186 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 EPB41L2O43491 1005 aaKnown RBP15.31■□□□□ 0.04
SS18-222ENST00000582792 GALR2O43603 387 aaPredicted RBP15.31■□□□□ 0.04
SS18-222ENST00000582792 EIF5BO60841 1220 aaKnown RBP15.31■□□□□ 0.04
SS18-222ENST00000582792 BRD1O95696 1058 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 GNA11P29992 359 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 MTHFRP42898 656 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 ALDH7A1P49419 539 aaKnown RBP15.31■□□□□ 0.04
SS18-222ENST00000582792 METAP2P50579 478 aaKnown RBP eCLIP15.31■□□□□ 0.04
SS18-222ENST00000582792 PRKCEQ02156 737 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 KRT32Q14532 448 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 SCLT1Q96NL6 688 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 DISC1Q9NRI5 854 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 DACT1Q9NYF0 836 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 PLXNA3P51805 1871 aa15.31■□□□□ 0.04
SS18-222ENST00000582792 NT5C1B-RDH14C9J2C7 533 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms