RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 BTNL10A8MVZ5 291 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 CCDC188H7C350 402 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 POLR2BP30876 1174 aaKnown RBP11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 PBX1P40424 430 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 PHKA2P46019 1235 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 STK4Q13043 487 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 CCDC144BQ3MJ40 725 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 HDXQ7Z353 690 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 VSIG10LQ86VR7 867 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 TRIM59Q8IWR1 403 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 KRT222Q8N1A0 295 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 NRBP1Q9UHY1 535 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 SLX4Q8IY92 1834 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 RRN3P2A6NIE6 340 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 SUPT20HL2P0C7V6 817 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 MAPK4P31152 587 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 NAMPTP43490 491 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 PDE6CP51160 858 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 HMGCS2P54868 508 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 TAP1Q03518 808 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 KCNH2Q12809 1159 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 BAATQ14032 418 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 RPS6KA1Q15418 735 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 NBPF9Q3BBW0 867 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 SEL1L2Q5TEA6 688 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 ZFPM1Q8IX07 1006 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 HSD17B14Q9BPX1 270 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 KCNF1Q9H3M0 494 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 L2HGDHQ9H9P8 463 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 HOMER2Q9NSB8 354 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 COL1A2P08123 1366 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 ZMYM2Q9UBW7 1377 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 TARSL2A2RTX5 802 aaKnown RBP11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 HBP1O60381 514 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 HIP1RO75146 1068 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 IL18RAPO95256 599 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 ZNF131P52739 623 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 TRPC3Q13507 836 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 MTMR3Q13615 1198 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 COL9A3Q14050 684 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 CFAP58Q5T655 872 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 IFT20Q8IY31 132 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 TMEM174Q8WUU8 243 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 PSPC1Q8WXF1 523 aaKnown RBP11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 GLG1Q92896 1179 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 MRPL4Q9BYD3 311 aaKnown RBP11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 SEPT11Q9NVA2 429 aaKnown RBP11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 AMFRQ9UKV5 643 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 VAV3Q9UKW4 847 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 PSME4Q14997 1843 aa11.01□□□□□ -0.65
TRAPPC8-211ENST00000582539 PP2D1A8MPX8 630 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 MED7O43513 233 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 KIF11P52732 1056 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 POLR2FP61218 127 aaKnown RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 CTTNQ14247 550 aaKnown RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 KRT39Q6A163 491 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 MAATS1Q7Z4T9 603 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 RSPH3Q86UC2 560 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 GPD1LQ8N335 351 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 UNC45AQ9H3U1 944 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 FAM207AQ9NSI2 230 aaPredicted RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 GCNT4Q9P109 453 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 MYH4Q9Y623 1939 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 SPDYE5A6NIY4 337 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 STILQ15468 1287 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 HAUS6Q7Z4H7 955 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 NT5DC4Q86YG4 428 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 KATNAL1Q9BW62 490 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 NFKBIEO00221 500 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 MED24O75448 989 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 ECE1P42892 770 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 PTK2Q05397 1052 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 KIF22Q14807 665 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 ZC3H3Q8IXZ2 948 aaKnown RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 BBOF1Q8ND07 529 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 DNAJC19Q96DA6 116 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 ATG4CQ96DT6 458 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 MMTAG2Q9BU76 263 aaKnown RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 CCDC94Q9BW85 323 aaPredicted RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 TMEM134Q9H6X4 195 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 PCDHA13Q9Y5I0 950 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 CCDC151A5D8V7 595 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 GH1P01241 217 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 EPHX2P34913 555 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 VAMP7P51809 220 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 SMYD4Q8IYR2 804 aaPredicted RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 GPRC5AQ8NFJ5 357 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 POMGNT1Q8WZA1 660 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 INPP4AQ96PE3 977 aaPredicted RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 MRPL47Q9HD33 250 aaKnown RBP11□□□□□ -0.65
TRAPPC8-211ENST00000582539 LZTFL1Q9NQ48 299 aa11□□□□□ -0.65
TRAPPC8-211ENST00000582539 HNRNPDLO14979 420 aaKnown RBP10.99□□□□□ -0.65
TRAPPC8-211ENST00000582539 GRM1Q13255 1194 aa10.99□□□□□ -0.65
TRAPPC8-211ENST00000582539 LRRC45Q96CN5 670 aa10.99□□□□□ -0.65
TRAPPC8-211ENST00000582539 ANKRD36BP1Q96IX9 119 aa10.99□□□□□ -0.65
TRAPPC8-211ENST00000582539 TCHPQ9BT92 498 aa10.99□□□□□ -0.65
TRAPPC8-211ENST00000582539 RAB17Q9H0T7 212 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms