RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 OPA1O60313 960 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 GLRX3O76003 335 aaKnown RBP6.58□□□□□ -1.36
PTPRM-207ENST00000578571 NPTXRO95502 500 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 LRG1P02750 347 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 PLA2G1BP04054 148 aaKnown RBP6.58□□□□□ -1.36
PTPRM-207ENST00000578571 KRT15P19012 456 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 GRIN1Q05586 938 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 RRS1Q15050 365 aaKnown RBP6.58□□□□□ -1.36
PTPRM-207ENST00000578571 TMEM177Q53S58 311 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.58□□□□□ -1.36
PTPRM-207ENST00000578571 ARHGEF25Q86VW2 580 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 DHX37Q8IY37 1157 aaKnown RBP6.58□□□□□ -1.36
PTPRM-207ENST00000578571 NIM1KQ8IY84 436 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 IP6K1Q92551 441 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 TOE1Q96GM8 510 aaKnown RBP6.58□□□□□ -1.36
PTPRM-207ENST00000578571 SYT3Q9BQG1 590 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 SAMD15Q9P1V8 674 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 POLKQ9UBT6 870 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 PLAAQ9Y263 795 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 NFAT5O94916 1531 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 COL14A1Q05707 1796 aaKnown RBP6.58□□□□□ -1.36
PTPRM-207ENST00000578571 FAM208AQ9UK61 1670 aaKnown RBP6.58□□□□□ -1.36
PTPRM-207ENST00000578571 LTN1O94822 1766 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 CRYBG1Q9Y4K1 1723 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 B4E1Z4 1266 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 KCNK3O14649 394 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 APPP05067 770 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 HOXC9P31274 260 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 MECP2P51608 486 aaKnown RBP6.57□□□□□ -1.36
PTPRM-207ENST00000578571 HTRA3P83110 453 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 FIGNQ5HY92 759 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 FSTL4Q6MZW2 842 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 TEPPQ6URK8 271 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 HHIPL2Q6UWX4 724 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 CD300LDQ6UXZ3 194 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 DDX11Q96FC9 970 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 NOX5Q96PH1 765 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 KRTAP4-12Q9BQ66 201 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 HSPBP1Q9NZL4 362 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 WASF3Q9UPY6 502 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 FAN1Q9Y2M0 1017 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 NUB1Q9Y5A7 615 aa6.57□□□□□ -1.36
PTPRM-207ENST00000578571 MAP2P11137 1827 aaKnown RBP6.57□□□□□ -1.36
PTPRM-207ENST00000578571 MARF1Q9Y4F3 1742 aaKnown RBP6.56□□□□□ -1.36
PTPRM-207ENST00000578571 ACOT7O00154 380 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 SMARCA5O60264 1052 aaPredicted RBP6.56□□□□□ -1.36
PTPRM-207ENST00000578571 JMJD7P0C870 316 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 CYP2C8P10632 490 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 GYS2P54840 703 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 PAN2Q504Q3 1202 aaKnown RBP6.56□□□□□ -1.36
PTPRM-207ENST00000578571 TM4SF20Q53R12 229 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 ZNF772Q68DY9 489 aaPredicted RBP6.56□□□□□ -1.36
PTPRM-207ENST00000578571 CNKSR3Q6P9H4 555 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 TOM1L2Q6ZVM7 507 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 DDX53Q86TM3 631 aaKnown RBP6.56□□□□□ -1.36
PTPRM-207ENST00000578571 LRRTM3Q86VH5 581 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 ZC3H18Q86VM9 953 aaKnown RBP6.56□□□□□ -1.36
PTPRM-207ENST00000578571 PROSER1Q86XN7 944 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 NOSTRINQ8IVI9 506 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 NLGN4XQ8N0W4 816 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 DACT3Q96B18 629 aaPredicted RBP6.56□□□□□ -1.36
PTPRM-207ENST00000578571 MFSD3Q96ES6 412 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 GORASP1Q9BQQ3 440 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 YIPF4Q9BSR8 244 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 GOLGA2P5Q9HBQ8 144 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 NWD2Q9ULI1 1742 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 PLEKHG2Q9H7P9 1386 aa6.56□□□□□ -1.36
PTPRM-207ENST00000578571 WDR17Q8IZU2 1322 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 MAPK8IP3Q9UPT6 1336 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 FAM90A27PA6NNH2 459 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 M0R2C6 588 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 TRAF5O00463 557 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 U2AF1L5P0DN76 240 aaPredicted RBP6.55□□□□□ -1.36
PTPRM-207ENST00000578571 FAHP16930 419 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 NKX3-2P78367 333 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 U2AF1Q01081 240 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPRM-207ENST00000578571 SEC23AQ15436 765 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 ZNF385BQ569K4 471 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 PIK3R6Q5UE93 754 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 CDCA2Q69YH5 1023 aaPredicted RBP6.55□□□□□ -1.36
PTPRM-207ENST00000578571 OTOP1Q7RTM1 612 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 C1QL4Q86Z23 238 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 LINC00482Q8N8I6 264 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 FNIP1Q8TF40 1166 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 RAPGEF4Q8WZA2 1011 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 PWWP2AQ96N64 755 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 NGRNQ9NPE2 291 aaKnown RBP6.55□□□□□ -1.36
PTPRM-207ENST00000578571 RBPJLQ9UBG7 517 aa6.55□□□□□ -1.36
PTPRM-207ENST00000578571 CRB1P82279 1406 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 A0A087X0B3 334 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 DBX1A6NMT0 343 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 CBX4O00257 560 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 RFXAPO00287 272 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 CLASP2O75122 1294 aaKnown RBP6.54□□□□□ -1.36
PTPRM-207ENST00000578571 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
PTPRM-207ENST00000578571 POU3F2P20265 443 aaPredicted RBP6.54□□□□□ -1.36
PTPRM-207ENST00000578571 CFPP27918 469 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 ITGA1P56199 1179 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms