RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 NME8Q8N427 588 aa24.17■■□□□ 1.46
CDC42EP4-203ENST00000578516 SYMPKQ92797 1274 aaKnown RBP24.17■■□□□ 1.46
CDC42EP4-203ENST00000578516 SCLT1Q96NL6 688 aa24.17■■□□□ 1.46
CDC42EP4-203ENST00000578516 ATP6V0A4Q9HBG4 840 aa24.17■■□□□ 1.46
CDC42EP4-203ENST00000578516 A0A087WZ62 844 aa24.16■■□□□ 1.46
CDC42EP4-203ENST00000578516 SPTLC2O15270 562 aa24.16■■□□□ 1.46
CDC42EP4-203ENST00000578516 PLCG1P19174 1290 aa24.16■■□□□ 1.46
CDC42EP4-203ENST00000578516 LONP1P36776 959 aaKnown RBP24.16■■□□□ 1.46
CDC42EP4-203ENST00000578516 WDR5P61964 334 aaKnown RBP24.16■■□□□ 1.46
CDC42EP4-203ENST00000578516 HYIQ5T013 277 aa24.16■■□□□ 1.46
CDC42EP4-203ENST00000578516 FDXACB1Q9BRP7 624 aaPredicted RBP24.16■■□□□ 1.46
CDC42EP4-203ENST00000578516 RUSC1Q9BVN2 902 aa24.16■■□□□ 1.46
CDC42EP4-203ENST00000578516 POLR3FQ9H1D9 316 aaPredicted RBP24.16■■□□□ 1.46
CDC42EP4-203ENST00000578516 A0A1W2PPC1 479 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 PARNO95453 639 aaKnown RBP24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 YEATS4O95619 227 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 NCLP19338 710 aaKnown RBP24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 ANP32AP39687 249 aaKnown RBP24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 RABGGTBP53611 331 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 KRI1Q8N9T8 703 aaKnown RBP24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 PRPF31Q8WWY3 499 aaKnown RBP24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 NLRP7Q8WX94 980 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 BSNDQ8WZ55 320 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 SEPT8Q92599 483 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 TMX1Q9H3N1 280 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 ERVK-5Q9HDB9 667 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 TSHZ2Q9NRE2 1034 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 PADI3Q9ULW8 664 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 COL4A3BPQ9Y5P4 624 aa24.15■■□□□ 1.46
CDC42EP4-203ENST00000578516 LAMA3Q16787 3333 aa24.14■■□□□ 1.46
CDC42EP4-203ENST00000578516 A0A087X0B3 334 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 MGEA5O60502 916 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 EYA4O95677 639 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 SSBP05455 408 aaKnown RBP eCLIP24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 ACTN1P12814 892 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 IBSPP21815 317 aaPredicted RBP24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 PBX2P40425 430 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 UBA7P41226 1012 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 CRYBB1P53674 252 aaPredicted RBP24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 NFX1Q12986 1120 aaKnown RBP24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 PAK2Q13177 524 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 CDK5RAP3Q96JB5 506 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 AK8Q96MA6 479 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 BLOC1S4Q9NUP1 217 aa24.14■■□□□ 1.45
CDC42EP4-203ENST00000578516 RPS6KA5O75582 802 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 DGAT1O75907 488 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 SRGAP2CP0DJJ0 459 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 XRCC6P12956 609 aaKnown RBP eCLIP24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 PDIA4P13667 645 aaKnown RBP24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 MUTP22033 750 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 GLRA2P23416 452 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 DNM2P50570 870 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 LAMTOR4Q0VGL1 99 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 DHX8Q14562 1220 aaKnown RBP24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 FAM117BQ6P1L5 589 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 PSPC1Q8WXF1 523 aaKnown RBP24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 GDPD2Q9HCC8 539 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 ST3GAL5Q9UNP4 418 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 PPME1Q9Y570 386 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 SLC4A7Q9Y6M7 1214 aa24.13■■□□□ 1.45
CDC42EP4-203ENST00000578516 COL4A6Q14031 1691 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 TTC3P53804 2025 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 NPHP3-ACAD11A0A0J9YXS1 232 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 RPLP2P05387 115 aaKnown RBP24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 DARSP14868 501 aaKnown RBP24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 MYOGP15173 224 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 ARL2P36404 184 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 CACNB1Q02641 598 aaPredicted RBP24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 RAD51AP2Q09MP3 1159 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 CAPSQ13938 189 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 FAM102BQ5T8I3 360 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 RTN4RL1Q86UN2 441 aaPredicted RBP24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 RASSF8Q8NHQ8 419 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 JPH2Q9BR39 696 aaPredicted RBP24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 MINDY3Q9H8M7 445 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 DNM3Q9UQ16 869 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 STK24Q9Y6E0 443 aa24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 MORC2Q9Y6X9 1032 aaPredicted RBP24.12■■□□□ 1.45
CDC42EP4-203ENST00000578516 CYP11B2P19099 503 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 FXR1P51114 621 aaKnown RBP eCLIP24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 IKBKEQ14164 716 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 MCM6Q14566 821 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 TPRNQ4KMQ1 711 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 AXDND1Q5T1B0 1012 aaPredicted RBP24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 SHC4Q6S5L8 630 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 RNF149Q8NC42 400 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 CALML4Q96GE6 196 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 PANK2Q9BZ23 570 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 CCSER1Q9C0I3 900 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 IFT122Q9HBG6 1241 aa24.11■■□□□ 1.45
CDC42EP4-203ENST00000578516 PPP6R2O75170 966 aa24.1■■□□□ 1.45
CDC42EP4-203ENST00000578516 BAIAP3O94812 1187 aa24.1■■□□□ 1.45
CDC42EP4-203ENST00000578516 PLA2G4BP0C869 781 aa24.1■■□□□ 1.45
CDC42EP4-203ENST00000578516 ATP2A2P16615 1042 aaKnown RBP24.1■■□□□ 1.45
CDC42EP4-203ENST00000578516 SLC12A3P55017 1021 aa24.1■■□□□ 1.45
CDC42EP4-203ENST00000578516 LRIT3Q3SXY7 679 aa24.1■■□□□ 1.45
CDC42EP4-203ENST00000578516 RINT1Q6NUQ1 792 aa24.1■■□□□ 1.45
CDC42EP4-203ENST00000578516 MYOCDQ8IZQ8 938 aa24.1■■□□□ 1.45
CDC42EP4-203ENST00000578516 DAW1Q8N136 415 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms