RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 KCTD17Q8N5Z5 321 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 SHCBP1Q8NEM2 672 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 KIAA1586Q9HCI6 787 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 CYP26B1Q9NR63 512 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 BTBD7Q9P203 1132 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 PIN4Q9Y237 131 aaKnown RBP11.01□□□□□ -0.65
SMG6-213ENST00000573166 ZNF500O60304 480 aaPredicted RBP11□□□□□ -0.65
SMG6-213ENST00000573166 MAGEA1P43355 309 aa11□□□□□ -0.65
SMG6-213ENST00000573166 FLT3LGP49771 235 aa11□□□□□ -0.65
SMG6-213ENST00000573166 CDC42EP1Q00587 391 aa11□□□□□ -0.65
SMG6-213ENST00000573166 TLK2Q86UE8 772 aa11□□□□□ -0.65
SMG6-213ENST00000573166 RNF208Q9H0X6 261 aa11□□□□□ -0.65
SMG6-213ENST00000573166 NDST4Q9H3R1 872 aa11□□□□□ -0.65
SMG6-213ENST00000573166 HMX1Q9NP08 348 aaPredicted RBP11□□□□□ -0.65
SMG6-213ENST00000573166 DNAI1Q9UI46 699 aa11□□□□□ -0.65
SMG6-213ENST00000573166 PYCARDQ9ULZ3 195 aa11□□□□□ -0.65
SMG6-213ENST00000573166 SLX4Q8IY92 1834 aa11□□□□□ -0.65
SMG6-213ENST00000573166 CSPG5O95196 566 aa11□□□□□ -0.65
SMG6-213ENST00000573166 SNX16P57768 344 aa11□□□□□ -0.65
SMG6-213ENST00000573166 NLRP11P59045 1033 aaKnown RBP11□□□□□ -0.65
SMG6-213ENST00000573166 STK4Q13043 487 aa11□□□□□ -0.65
SMG6-213ENST00000573166 LIN9Q5TKA1 542 aa11□□□□□ -0.65
SMG6-213ENST00000573166 KIAA1841Q6NSI8 718 aa11□□□□□ -0.65
SMG6-213ENST00000573166 TRIM50Q86XT4 487 aa11□□□□□ -0.65
SMG6-213ENST00000573166 SYT2Q8N9I0 419 aaPredicted RBP11□□□□□ -0.65
SMG6-213ENST00000573166 IL31RAQ8NI17 732 aa11□□□□□ -0.65
SMG6-213ENST00000573166 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
SMG6-213ENST00000573166 HESX1Q9UBX0 185 aa11□□□□□ -0.65
SMG6-213ENST00000573166 ASAP2O43150 1006 aa11□□□□□ -0.65
SMG6-213ENST00000573166 ACTN4O43707 911 aaKnown RBP11□□□□□ -0.65
SMG6-213ENST00000573166 PLS3P13797 630 aa11□□□□□ -0.65
SMG6-213ENST00000573166 RINT1Q6NUQ1 792 aa11□□□□□ -0.65
SMG6-213ENST00000573166 SGIP1Q9BQI5 828 aa11□□□□□ -0.65
SMG6-213ENST00000573166 MED10Q9BTT4 135 aa11□□□□□ -0.65
SMG6-213ENST00000573166 XPNPEP3Q9NQH7 507 aa11□□□□□ -0.65
SMG6-213ENST00000573166 GCNT4Q9P109 453 aa11□□□□□ -0.65
SMG6-213ENST00000573166 MYH2Q9UKX2 1941 aa11□□□□□ -0.65
SMG6-213ENST00000573166 TAF1P21675 1872 aa11□□□□□ -0.65
SMG6-213ENST00000573166 CYP3A4P08684 503 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 ZNF286BP0CG31 522 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 CLCN3P51790 818 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 IQSEC1Q6DN90 963 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 OTOP1Q7RTM1 612 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 CCDC155Q8N6L0 562 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 GOLGA1Q92805 767 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 MRFAP1L1Q96HT8 127 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 AGO2Q9UKV8 859 aaKnown RBP10.99□□□□□ -0.65
SMG6-213ENST00000573166 KLRC1P26715 233 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 SLC26A2P50443 739 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 ATN1P54259 1190 aaPredicted RBP10.99□□□□□ -0.65
SMG6-213ENST00000573166 MFAP3P55082 362 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 DPYDQ12882 1025 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 MYO1EQ12965 1108 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 DCUN1D2Q6PH85 259 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
SMG6-213ENST00000573166 UBXN4Q92575 508 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 TUBE1Q9UJT0 475 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 ZNF112Q9UJU3 913 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 C17orf102A2RUQ5 167 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 LRRN2O75325 713 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 GCLMP48507 274 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 SEMA3FQ13275 785 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 EP400NLQ6ZTU2 488 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 GPRC5CQ9NQ84 441 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 NRBP1Q9UHY1 535 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 IRS2Q9Y4H2 1338 aa10.99□□□□□ -0.65
SMG6-213ENST00000573166 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 PPFIA4O75335 1185 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 UBA1P22314 1058 aaKnown RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 MAP2K1Q02750 393 aaPredicted RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 PTK2Q05397 1052 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 KRT31Q15323 416 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 KIAA0753Q2KHM9 967 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 ZC2HC1CQ53FD0 456 aaPredicted RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 HSP90B2PQ58FF3 399 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 TCP11X2Q5H9J9 407 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 COPS5Q92905 334 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 SLC5A5Q92911 643 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 CEP63Q96MT8 703 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 APBA2Q99767 749 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 CTTNBP2NLQ9P2B4 639 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 PCDHB4Q9Y5E5 795 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 BRWD3Q6RI45 1802 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 ARHGAP6O43182 974 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 RHOBTB3O94955 611 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 ITGB5P18084 799 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 CIITAP33076 1130 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 SMC1AQ14683 1233 aaKnown RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 CCDC144BQ3MJ40 725 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 ZNF484Q5JVG2 852 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 TAF3Q5VWG9 929 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 C4orf19Q8IY42 314 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 RUSC1Q9BVN2 902 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 NACA2Q9H009 215 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 ACBD3Q9H3P7 528 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 STARD7Q9NQZ5 370 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 UNCXA6NJT0 531 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 RPS6KA5O75582 802 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 KIAA1755Q5JYT7 1200 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms