RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 RFX1P22670 979 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
CHMP6-202ENST00000571457 PUM1Q14671 1186 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHMP6-202ENST00000571457 MIS18BP1Q6P0N0 1132 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 CASC1Q6TDU7 716 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 ABHD15Q6UXT9 468 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 CCDC149Q6ZUS6 474 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 ECHDC2Q86YB7 292 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 CKAP2LQ8IYA6 745 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 SIX5Q8N196 739 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 VPS52Q8N1B4 723 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 CYP2W1Q8TAV3 490 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 RUFY2Q8WXA3 655 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 RMDN1Q96DB5 314 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 MAP7D2Q96T17 732 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 PPP1R16BQ96T49 567 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 MYL10Q9BUA6 226 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 RNF19AQ9NV58 838 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 IGSF9Q9P2J2 1179 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 DUSP12Q9UNI6 340 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 CEP131Q9UPN4 1083 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 GPR179Q6PRD1 2367 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 CHD8Q9HCK8 2581 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 A0A0U1RQF3 1178 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 MED19A0JLT2 244 aaPredicted RBP12.88□□□□□ -0.35
CHMP6-202ENST00000571457 ZBTB42B2RXF5 422 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 MEIS1O00470 390 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 STK25O00506 426 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 MAGEB2O15479 319 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 PLEKHA8P1O95397 391 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 VTNP04004 478 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 TMOD1P28289 359 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 BCAR1P56945 870 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 ANTXR2P58335 489 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 NUCB1Q02818 461 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 NONOQ15233 471 aaKnown RBP eCLIP12.88□□□□□ -0.356e-7■■■□□ 18.8
CHMP6-202ENST00000571457 CLLU1OSQ5K130 101 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 ZC3H14Q6PJT7 736 aaKnown RBP12.88□□□□□ -0.35
CHMP6-202ENST00000571457 TMC5Q6UXY8 1006 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 HEATR3Q7Z4Q2 680 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 CCDC60Q8IWA6 550 aaPredicted RBP12.88□□□□□ -0.35
CHMP6-202ENST00000571457 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
CHMP6-202ENST00000571457 IL25Q9H293 177 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 SFXN1Q9H9B4 322 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 LY9Q9HBG7 655 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 STK39Q9UEW8 545 aa12.88□□□□□ -0.35
CHMP6-202ENST00000571457 CCDC69A6NI79 296 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 CCNE2O96020 404 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 CTSAP10619 480 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 EPCAMP16422 314 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 EIF4BP23588 611 aaKnown RBP12.87□□□□□ -0.35
CHMP6-202ENST00000571457 ZNF76P36508 570 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 METAP2P50579 478 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHMP6-202ENST00000571457 NLRP11P59045 1033 aaKnown RBP12.87□□□□□ -0.35
CHMP6-202ENST00000571457 SWSAP1Q6NVH7 229 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 NIPA1Q7RTP0 329 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 GPR149Q86SP6 731 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
CHMP6-202ENST00000571457 KIAA2013Q8IYS2 634 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 HELQQ8TDG4 1101 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 SLC22A17Q8WUG5 538 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 HINFPQ9BQA5 517 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 ZBP1Q9H171 429 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 KCNK12Q9HB15 430 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 WNT16Q9UBV4 365 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 AKT3Q9Y243 479 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 CHD6Q8TD26 2715 aa12.87□□□□□ -0.35
CHMP6-202ENST00000571457 NT5C1B-RDH14C9J2C7 533 aa12.86□□□□□ -0.35
CHMP6-202ENST00000571457 DDX39AO00148 427 aaKnown RBP12.86□□□□□ -0.35
CHMP6-202ENST00000571457 KANK3Q6NY19 840 aa12.86□□□□□ -0.35
CHMP6-202ENST00000571457 C15orf39Q6ZRI6 1047 aa12.86□□□□□ -0.35
CHMP6-202ENST00000571457 DDX53Q86TM3 631 aaKnown RBP12.86□□□□□ -0.35
CHMP6-202ENST00000571457 ZNF598Q86UK7 904 aaKnown RBP12.86□□□□□ -0.35
CHMP6-202ENST00000571457 CMTR1Q8N1G2 835 aaKnown RBP12.86□□□□□ -0.35
CHMP6-202ENST00000571457 RUBCNQ92622 972 aa12.86□□□□□ -0.35
CHMP6-202ENST00000571457 EMILIN2Q9BXX0 1053 aa12.86□□□□□ -0.35
CHMP6-202ENST00000571457 GLT8D2Q9H1C3 349 aa12.86□□□□□ -0.35
CHMP6-202ENST00000571457 RIC8AQ9NPQ8 531 aa12.86□□□□□ -0.35
CHMP6-202ENST00000571457 TCEAL9Q9UHQ7 104 aa12.86□□□□□ -0.35
CHMP6-202ENST00000571457 MYH9P35579 1960 aaKnown RBP12.86□□□□□ -0.35
CHMP6-202ENST00000571457 DENND4AQ7Z401 1863 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 hCG_1642624A0A1W2PR95 340 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 ZC3H11AO75152 810 aaKnown RBP eCLIP12.85□□□□□ -0.35
CHMP6-202ENST00000571457 ATP4AP20648 1035 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 MCM5P33992 734 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 SREBF1P36956 1147 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 CLCN3P51790 818 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 NAPAP54920 295 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 PTH1RQ03431 593 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 LETM2Q2VYF4 491 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 EFCAB12Q6NXP0 572 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 PPP1R18Q6NYC8 613 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 ELMSAN1Q6PJG2 1045 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 CCDC82Q8N4S0 544 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 AUTS2Q8WXX7 1259 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 IGSF21Q96ID5 467 aa12.85□□□□□ -0.35
CHMP6-202ENST00000571457 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms