RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 AXIN1O15169 862 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 MAP3K13O43283 966 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 MGEA5O60502 916 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 SORBS3O60504 671 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 PRDM1O75626 825 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 EPN2O95208 641 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 PAPLNO95428 1278 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 NTRK1P04629 796 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 FGFR1P11362 822 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 CLCN4P51793 760 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 POLGP54098 1239 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 FAM189BP81408 668 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 SRSF5Q13243 272 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 ARHGEF16Q5VV41 709 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 DAB2IPQ5VWQ8 1189 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 VPS52Q8N1B4 723 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 LRRC43Q8N309 656 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 AUTS2Q8WXX7 1259 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 SLC39A7Q92504 469 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 TBC1D5Q92609 795 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 CLUAP1Q96AJ1 413 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 LRIG1Q96JA1 1093 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 CASD1Q96PB1 797 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 RPP25Q9BUL9 199 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 ATP6V0A4Q9HBG4 840 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 TMEM161AQ9NX61 479 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 TUBE1Q9UJT0 475 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 KLK13Q9UKR3 277 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 MRPS17Q9Y2R5 130 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 NOP58Q9Y2X3 529 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 TRPV2Q9Y5S1 764 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 ZFP37Q9Y6Q3 630 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 KDM3AQ9Y4C1 1321 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 MGAQ8IWI9 3026 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 CCDC195A0A1B0GUA6 201 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 GOLIM4O00461 696 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 NOP56O00567 594 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 HOXA2O43364 376 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 SURF6O75683 361 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 SEC24BO95487 1268 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 GNAI2P04899 355 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 EIF2AK2P19525 551 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 IBSPP21815 317 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 TFAP4Q01664 338 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 UBE3CQ15386 1083 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 CCDC96Q2M329 555 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 ZNF852Q6ZMS4 543 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 LONP2Q86WA8 852 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 ZNF687Q8N1G0 1237 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 HNRNPLLQ8WVV9 542 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 FGF14Q92915 247 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 TMEM169Q96HH4 297 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 ADAM2Q99965 735 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 API5Q9BZZ5 524 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 CLMPQ9H6B4 373 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 PXMP2Q9NR77 195 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 PCDHGA5Q9Y5G8 931 aa7.73□□□□□ -1.17
HERPUD1-217ENST00000569429 PDCD11Q14690 1871 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 PTPRBP23467 1997 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 THADAQ6YHU6 1953 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 SHISA7A6NL88 538 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 C4orf47A7E2U8 309 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 GSG1L2A8MUP6 293 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 CHURC1-FNTBB4DL54 471 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 M0QZ92 97 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 PAPSS2O95340 614 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 HSPD1P10809 573 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 RAP1GAPP47736 663 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 CXCL12P48061 93 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 NOVP48745 357 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 FNTBP49356 437 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 NFX1Q12986 1120 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 PPFIA1Q13136 1202 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 MARCH8Q5T0T0 291 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 KIAA1211LQ6NV74 962 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 TPRG1Q6ZUI0 275 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 CEP68Q76N32 757 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 DDX53Q86TM3 631 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 TRIM50Q86XT4 487 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 LSM14AQ8ND56 463 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 SSH3Q8TE77 659 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 MKNK1Q9BUB5 465 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 CELF4Q9BZC1 486 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 VPS45Q9NRW7 570 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 RNF19AQ9NV58 838 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 STX8Q9UNK0 236 aa7.72□□□□□ -1.17
HERPUD1-217ENST00000569429 DENND3A2RUS2 1198 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 CARNS1A5YM72 827 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 ATXN7O15265 892 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 INPPL1O15357 1258 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 KRT38O76015 456 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 KLRC2P26717 231 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 ALDH7A1P49419 539 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 METAP2P50579 478 aaKnown RBP eCLIP7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 SATB1Q01826 763 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 SCAPQ12770 1279 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 GRIK4Q16099 956 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 TMEM266Q2M3C6 531 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 USH1GQ495M9 461 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 ODR4Q5SWX8 454 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms