RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 KANK3Q6NY19 840 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 TAF2Q6P1X5 1199 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 MTHFD1LQ6UB35 978 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 CCDC155Q8N6L0 562 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 SYT2Q8N9I0 419 aaPredicted RBP17.81■□□□□ 0.44
USB1-215ENST00000569252 LMBR1Q8WVP7 490 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 TCP11Q8WWU5 503 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 TOX2Q96NM4 488 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 NECAB3Q96P71 396 aaPredicted RBP17.81■□□□□ 0.44
USB1-215ENST00000569252 SH2D3AQ9BRG2 576 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 NKX2-4Q9H2Z4 354 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 MAGEF1Q9HAY2 307 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 YBX2Q9Y2T7 364 aaKnown RBP17.81■□□□□ 0.44
USB1-215ENST00000569252 PCDHA2Q9Y5H9 948 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 MYH9P35579 1960 aaKnown RBP17.8■□□□□ 0.44
USB1-215ENST00000569252 XIRP2A4UGR9 3374 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 TMEM150BA6NC51 233 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 MAFO75444 373 aaPredicted RBP17.8■□□□□ 0.44
USB1-215ENST00000569252 MYOGP15173 224 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 RABGGTBP53611 331 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 CDC42EP1Q00587 391 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 TJAP1Q5JTD0 557 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 EFCAB12Q6NXP0 572 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 FAM126BQ8IXS8 530 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 CNNM3Q8NE01 707 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 MCPH1Q8NEM0 835 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 TRAPPC12Q8WVT3 735 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 MAP7D2Q96T17 732 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 MTRQ99707 1265 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 TIPINQ9BVW5 301 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 ATP6V0A4Q9HBG4 840 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 KCND2Q9NZV8 630 aa17.8■□□□□ 0.44
USB1-215ENST00000569252 TCF20Q9UGU0 1960 aaKnown RBP17.79■□□□□ 0.44
USB1-215ENST00000569252 M0QZ92 97 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 TREHO43280 583 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 USO1O60763 962 aaKnown RBP17.79■□□□□ 0.44
USB1-215ENST00000569252 GADD45BO75293 160 aaPredicted RBP17.79■□□□□ 0.44
USB1-215ENST00000569252 ZNF202O95125 648 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 COL9A1P20849 921 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 IGFBP4P22692 258 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 CCL23P55773 120 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 FAM160A1Q05DH4 1040 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 PTK7Q13308 1070 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 MCM6Q14566 821 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 TARBP2Q15633 366 aaKnown RBP17.79■□□□□ 0.44
USB1-215ENST00000569252 NME8Q8N427 588 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 TRPV6Q9H1D0 765 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 TRMT13Q9NUP7 481 aaKnown RBP17.79■□□□□ 0.44
USB1-215ENST00000569252 KCNG1Q9UIX4 513 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 HPSEQ9Y251 543 aa17.79■□□□□ 0.44
USB1-215ENST00000569252 TMEM265A0A087WTH1 108 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 FAM237AA0A1B0GTK4 181 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 SMIM35A0A1B0GVV1 85 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 B4GALT4O60513 344 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 KINO60870 393 aaKnown RBP17.78■□□□□ 0.44
USB1-215ENST00000569252 SLFN14P0C7P3 912 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 CYP11B2P19099 503 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 ZNF200P98182 395 aaPredicted RBP17.78■□□□□ 0.44
USB1-215ENST00000569252 BFSP2Q13515 415 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 FAM102BQ5T8I3 360 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 RASIP1Q5U651 963 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 IER5Q5VY09 327 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 RINT1Q6NUQ1 792 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 MAEAQ7L5Y9 396 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 OTOP2Q7RTS6 562 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 GPBP1Q86WP2 473 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 ZNF710Q8N1W2 664 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 MICALL1Q8N3F8 863 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 FAM49AQ9H0Q0 323 aaPredicted RBP17.78■□□□□ 0.44
USB1-215ENST00000569252 TNMDQ9H2S6 317 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 AKT3Q9Y243 479 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 BDP1A6H8Y1 2624 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 NCOR1O75376 2440 aa17.78■□□□□ 0.44
USB1-215ENST00000569252 MBLAC1A4D2B0 266 aaPredicted RBP17.77■□□□□ 0.44
USB1-215ENST00000569252 ZBTB42B2RXF5 422 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 TNFRSF10AO00220 468 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 ASAP2O43150 1006 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 C22orf31O95567 290 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 MCM4P33991 863 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 SLC12A3P55017 1021 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 PPIGQ13427 754 aaKnown RBP eCLIP17.77■□□□□ 0.441e-8■□□□□ 8.5
USB1-215ENST00000569252 EMC2Q15006 297 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 LONRF3Q496Y0 759 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 MARCH8Q5T0T0 291 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 KCNK18Q7Z418 384 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 DRC1Q96MC2 740 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 DHX33Q9H6R0 707 aaKnown RBP17.77■□□□□ 0.44
USB1-215ENST00000569252 LMBRD1Q9NUN5 540 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 BLOC1S4Q9NUP1 217 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 SUCLA2Q9P2R7 463 aaPredicted RBP17.77■□□□□ 0.44
USB1-215ENST00000569252 SERTAD1Q9UHV2 236 aa17.77■□□□□ 0.44
USB1-215ENST00000569252 A0A087X0B3 334 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 HOXC8P31273 242 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 THPOP40225 353 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 ADAM17P78536 824 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 MXD4Q14582 209 aaPredicted RBP17.76■□□□□ 0.43
USB1-215ENST00000569252 SERINC5Q86VE9 423 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 LRRC71Q8N4P6 559 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 DNAJB3Q8WWF6 145 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms