RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 ZRSR1Q15695 479 aaKnown RBP19.17■□□□□ 0.66
COMMD4-220ENST00000567720 LRIT3Q3SXY7 679 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 SPECC1Q5M775 1068 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 USP49Q70CQ1 688 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 BHMT2Q9H2M3 363 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 SUCLA2Q9P2R7 463 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-220ENST00000567720 KIAA1671Q9BY89 1806 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 NLRC5Q86WI3 1866 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 ARHGEF35A5YM69 484 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 ANP32AP39687 249 aaKnown RBP19.16■□□□□ 0.66
COMMD4-220ENST00000567720 CRYBB1P53674 252 aaPredicted RBP19.16■□□□□ 0.66
COMMD4-220ENST00000567720 WDR5P61964 334 aaKnown RBP19.16■□□□□ 0.66
COMMD4-220ENST00000567720 FAM228AQ86W67 206 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 RHPN2Q8IUC4 686 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 KSR1Q8IVT5 923 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 KRI1Q8N9T8 703 aaKnown RBP19.16■□□□□ 0.66
COMMD4-220ENST00000567720 PSPC1Q8WXF1 523 aaKnown RBP19.16■□□□□ 0.66
COMMD4-220ENST00000567720 LINC01599Q8WXQ3 324 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 SEPT8Q92599 483 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 PLIN2Q99541 437 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 MTIF3Q9H2K0 278 aaKnown RBP19.16■□□□□ 0.66
COMMD4-220ENST00000567720 NOC2LQ9Y3T9 749 aaKnown RBP19.16■□□□□ 0.66
COMMD4-220ENST00000567720 COL4A3BPQ9Y5P4 624 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 SQORQ9Y6N5 450 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 CHD7Q9P2D1 2997 aa19.16■□□□□ 0.66
COMMD4-220ENST00000567720 SPTLC2O15270 562 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 PPP6R2O75170 966 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 EYA4O95677 639 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 UBA7P41226 1012 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 DNM2P50570 870 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 DEFB103AP81534 67 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 PAK2Q13177 524 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 KARSQ15046 597 aaKnown RBP19.15■□□□□ 0.66
COMMD4-220ENST00000567720 PADI6Q6TGC4 694 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 EXOC8Q8IYI6 725 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 ASAP3Q8TDY4 903 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 NLRP7Q8WX94 980 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 SYMPKQ92797 1274 aaKnown RBP19.15■□□□□ 0.66
COMMD4-220ENST00000567720 APBB2Q92870 758 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 EPSTI1Q96J88 318 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 NLRP4Q96MN2 994 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 SCLT1Q96NL6 688 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 NT5C3AQ9H0P0 336 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 ERVK-5Q9HDB9 667 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 GPRC5CQ9NQ84 441 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 PADI3Q9ULW8 664 aa19.15■□□□□ 0.66
COMMD4-220ENST00000567720 FNDC1Q4ZHG4 1894 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-220ENST00000567720 A0A087WZ62 844 aa19.14■□□□□ 0.65
COMMD4-220ENST00000567720 SLC26A4O43511 780 aa19.14■□□□□ 0.65
COMMD4-220ENST00000567720 PLCG1P19174 1290 aa19.14■□□□□ 0.65
COMMD4-220ENST00000567720 ATL3Q6DD88 541 aa19.14■□□□□ 0.65
COMMD4-220ENST00000567720 ZNF410Q86VK4 478 aa19.14■□□□□ 0.65
COMMD4-220ENST00000567720 USP38Q8NB14 1042 aa19.14■□□□□ 0.65
COMMD4-220ENST00000567720 TCP11Q8WWU5 503 aa19.14■□□□□ 0.65
COMMD4-220ENST00000567720 PRPF31Q8WWY3 499 aaKnown RBP19.14■□□□□ 0.65
COMMD4-220ENST00000567720 CDK5RAP3Q96JB5 506 aa19.14■□□□□ 0.65
COMMD4-220ENST00000567720 FDXACB1Q9BRP7 624 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-220ENST00000567720 CCSER1Q9C0I3 900 aa19.14■□□□□ 0.65
COMMD4-220ENST00000567720 POLR3FQ9H1D9 316 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-220ENST00000567720 COL4A4P53420 1690 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-220ENST00000567720 ABHD14A-ACY1A0A1B0GW23 586 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-220ENST00000567720 GRXCR1A8MXD5 290 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 RPS6KA5O75582 802 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 DARSP14868 501 aaKnown RBP19.13■□□□□ 0.65
COMMD4-220ENST00000567720 ARL2P36404 184 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 LAMTOR4Q0VGL1 99 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 CAPSQ13938 189 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 IKBKEQ14164 716 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 MAEAQ7L5Y9 396 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 ZNF710Q8N1W2 664 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 MCPH1Q8NEM0 835 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 LRCH3Q96II8 777 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 RUSC1Q9BVN2 902 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 TMX1Q9H3N1 280 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 BLOC1S4Q9NUP1 217 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 DNM3Q9UQ16 869 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 SLC4A7Q9Y6M7 1214 aa19.13■□□□□ 0.65
COMMD4-220ENST00000567720 EFCAB14O75071 495 aa19.12■□□□□ 0.65
COMMD4-220ENST00000567720 CSDE1O75534 798 aaKnown RBP19.12■□□□□ 0.65
COMMD4-220ENST00000567720 CYP11B2P19099 503 aa19.12■□□□□ 0.65
COMMD4-220ENST00000567720 FGFR4P22455 802 aa19.12■□□□□ 0.65
COMMD4-220ENST00000567720 GLRA2P23416 452 aa19.12■□□□□ 0.65
COMMD4-220ENST00000567720 EIF4BP23588 611 aaKnown RBP19.12■□□□□ 0.65
COMMD4-220ENST00000567720 KCNJ6P48051 423 aa19.12■□□□□ 0.65
COMMD4-220ENST00000567720 FXR1P51114 621 aaKnown RBP eCLIP19.12■□□□□ 0.65
COMMD4-220ENST00000567720 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.12■□□□□ 0.65
COMMD4-220ENST00000567720 TMCO2Q7Z6W1 182 aaPredicted RBP19.12■□□□□ 0.65
COMMD4-220ENST00000567720 KCNG4Q8TDN1 519 aa19.12■□□□□ 0.65
COMMD4-220ENST00000567720 CALML4Q96GE6 196 aa19.12■□□□□ 0.65
COMMD4-220ENST00000567720 SLC9A7Q96T83 725 aa19.12■□□□□ 0.65
COMMD4-220ENST00000567720 IFT122Q9HBG6 1241 aa19.12■□□□□ 0.65
COMMD4-220ENST00000567720 RALGAPA2Q2PPJ7 1873 aa19.11■□□□□ 0.65
COMMD4-220ENST00000567720 A0A087X0B3 334 aa19.11■□□□□ 0.65
COMMD4-220ENST00000567720 MGEA5O60502 916 aa19.11■□□□□ 0.65
COMMD4-220ENST00000567720 ATP2A2P16615 1042 aaKnown RBP19.11■□□□□ 0.65
COMMD4-220ENST00000567720 SLC12A3P55017 1021 aa19.11■□□□□ 0.65
COMMD4-220ENST00000567720 KRT85P78386 507 aa19.11■□□□□ 0.65
COMMD4-220ENST00000567720 NUCB2P80303 420 aa19.11■□□□□ 0.65
COMMD4-220ENST00000567720 AXDND1Q5T1B0 1012 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms