RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 USP17L1Q7RTZ2 530 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 MCPH1Q8NEM0 835 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 SPATA4Q8NEY3 305 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 RFFLQ8WZ73 363 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 KCNB2Q92953 911 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 LRRC37BQ96QE4 947 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 TTC1Q99614 292 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 SH3GL3Q99963 347 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 ZNF577Q9BSK1 485 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 KLC4Q9NSK0 619 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 KCND2Q9NZV8 630 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 PCDHB4Q9Y5E5 795 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 A0A0G2JLW4 131 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 GOLGA8MH3BSY2 632 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 PALMO75781 387 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 KRT1P04264 644 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 ADORA1P30542 326 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 MDH1P40925 334 aaKnown RBP4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 USP11P51784 963 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 POLGP54098 1239 aaPredicted RBP4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 AP2B1P63010 937 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 PSMD6Q15008 389 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 FAM83BQ5T0W9 1011 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 KRT80Q6KB66 452 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 MIS18BP1Q6P0N0 1132 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 RBM43Q6ZSC3 357 aaKnown RBP4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 ANO5Q75V66 913 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 RFX6Q8HWS3 928 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 RDH13Q8NBN7 331 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 RAD54LQ92698 747 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 TRIM56Q9BRZ2 755 aaKnown RBP4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 PLA2G12BQ9BX93 195 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 KLC2Q9H0B6 622 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 KMT5AQ9NQR1 393 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 GPHNQ9NQX3 736 aaPredicted RBP4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 ADD3Q9UEY8 706 aaKnown RBP4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 CAPN9O14815 690 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 GYG2O15488 501 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 BMP3P12645 472 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 PDCLQ13371 301 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 GRM4Q14833 912 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 E2F5Q15329 346 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 CCNI2Q6ZMN8 369 aaPredicted RBP4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 GIPC2Q8TF65 315 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 TRAIPQ9BWF2 469 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 ARL2BPQ9Y2Y0 163 aa4.66□□□□□ -1.66
LPCAT2-208ENST00000566915 UBE4BO95155 1302 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 COL22A1Q8NFW1 1626 aaPredicted RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 CAMTA1Q9Y6Y1 1673 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 RASSF10A6NK89 507 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 PDXKO00764 312 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 ASAP2O43150 1006 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 SPAG6O75602 509 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 HAUS5O94927 633 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 ALDH1A1P00352 501 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 GSTA1P08263 222 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 KRT7P08729 469 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 GSTA2P09210 222 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 SRGNP10124 158 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 MX2P20592 715 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 CCND1P24385 295 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 HSPA9P38646 679 aaKnown RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 CDK17Q00537 523 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 CYP27A1Q02318 531 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 NR1I3Q14994 352 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 MAPRE2Q15555 327 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 E4F1Q66K89 784 aaPredicted RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 NXNQ6DKJ4 435 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 PDXDC1Q6P996 788 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 EPM2AIP1Q7L775 607 aaPredicted RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 LCORLQ8N3X6 602 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 TMEM35BQ8NCS4 154 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 SCYL1Q96KG9 808 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 MTRQ99707 1265 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 TMEM106CQ9BVX2 250 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 FRMD8Q9BZ67 464 aaPredicted RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 GOLPH3LQ9H4A5 285 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 LY9Q9HBG7 655 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 UBE2TQ9NPD8 197 aaPredicted RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 ST7Q9NRC1 585 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 PKD2L1Q9P0L9 805 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 UVRAGQ9P2Y5 699 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 PI4KBQ9UBF8 816 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 APOBEC2Q9Y235 224 aaKnown RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 MAD1L1Q9Y6D9 718 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 NRKQ7Z2Y5 1582 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 VGLL3A8MV65 326 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 TMEM232C9JQI7 657 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 TBX3O15119 743 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 TLR3O15455 904 aaKnown RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 S100BP04271 92 aaPredicted RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 PEX19P40855 299 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 PRCPP42785 496 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 VPS41P49754 854 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 GTF2IP78347 998 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 IRX5P78411 483 aaPredicted RBP4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 SATB1Q01826 763 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 ART3Q13508 389 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 EDRF1Q3B7T1 1238 aa4.65□□□□□ -1.66
LPCAT2-208ENST00000566915 FIGNQ5HY92 759 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms