RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 M0R2N6 131 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 CPLX1O14810 134 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 EOMESO95936 686 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 DARSP14868 501 aaKnown RBP16.9■□□□□ 0.3
RNF40-209ENST00000566703 NRIP1P48552 1158 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 GPC3P51654 580 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 PRKCEQ02156 737 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 TBC1D8BQ0IIM8 1120 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 CLUL1Q15846 466 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 XKR3Q5GH77 459 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 B3GNT9Q6UX72 402 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 ECHDC2Q86YB7 292 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 THNSL1Q8IYQ7 743 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 DAGLBQ8NCG7 672 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 SMRP1Q8NCR6 262 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 MBOAT7Q96N66 472 aa16.9■□□□□ 0.3
RNF40-209ENST00000566703 CSPG5O95196 566 aa16.89■□□□□ 0.29
RNF40-209ENST00000566703 FGFR1P11362 822 aa16.89■□□□□ 0.29
RNF40-209ENST00000566703 IBSPP21815 317 aaPredicted RBP16.89■□□□□ 0.29
RNF40-209ENST00000566703 HERC4Q5GLZ8 1057 aaPredicted RBP16.89■□□□□ 0.29
RNF40-209ENST00000566703 MIER3Q7Z3K6 550 aa16.89■□□□□ 0.29
RNF40-209ENST00000566703 RBM23Q86U06 439 aaKnown RBP16.89■□□□□ 0.29
RNF40-209ENST00000566703 ABI1Q8IZP0 508 aa16.89■□□□□ 0.29
RNF40-209ENST00000566703 LRRC71Q8N4P6 559 aa16.89■□□□□ 0.29
RNF40-209ENST00000566703 RSPH1Q8WYR4 309 aa16.89■□□□□ 0.29
RNF40-209ENST00000566703 CASD1Q96PB1 797 aa16.89■□□□□ 0.29
RNF40-209ENST00000566703 DACT1Q9NYF0 836 aa16.89■□□□□ 0.29
RNF40-209ENST00000566703 LOXHD1Q8IVV2 1947 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 EVPLQ92817 2033 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 A0A0U1RQF3 1178 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 FSCN2O14926 492 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 CHMP2AO43633 222 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 ERVFC1P60507 584 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 DUSP6Q16828 381 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 TMEM184AQ6ZMB5 413 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 MRPS27Q92552 414 aaKnown RBP16.88■□□□□ 0.29
RNF40-209ENST00000566703 GCOM2Q9BZD3 368 aaPredicted RBP16.88■□□□□ 0.29
RNF40-209ENST00000566703 KCNH6Q9H252 994 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 NGRNQ9NPE2 291 aaKnown RBP16.88■□□□□ 0.29
RNF40-209ENST00000566703 CHST12Q9NRB3 414 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 RNF19AQ9NV58 838 aa16.88■□□□□ 0.29
RNF40-209ENST00000566703 MYH9P35579 1960 aaKnown RBP16.88■□□□□ 0.29
RNF40-209ENST00000566703 IGKV6-21A0A0C4DH24 114 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 STBD1O95210 358 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 GLP2RO95838 553 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
RNF40-209ENST00000566703 PPM1AP35813 382 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 DNM2P50570 870 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 KRT17Q04695 432 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 NONOQ15233 471 aaKnown RBP eCLIP16.87■□□□□ 0.29
RNF40-209ENST00000566703 UGCGQ16739 394 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 KCNT2Q6UVM3 1135 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 LRRC55Q6ZSA7 311 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 KRT25Q7Z3Z0 450 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 RNF135Q8IUD6 432 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 LRRC43Q8N309 656 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 ETNPPLQ8TBG4 499 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 ZNF558Q96NG5 402 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 CEP89Q96ST8 783 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 JPH2Q9BR39 696 aaPredicted RBP16.87■□□□□ 0.29
RNF40-209ENST00000566703 TRAIPQ9BWF2 469 aa16.87■□□□□ 0.29
RNF40-209ENST00000566703 INO80BQ9C086 356 aaPredicted RBP16.87■□□□□ 0.29
RNF40-209ENST00000566703 CARNS1A5YM72 827 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 LOC730098B7Z3J9 87 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 PER2O15055 1255 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 DKC1O60832 514 aaKnown RBP eCLIP16.86■□□□□ 0.29
RNF40-209ENST00000566703 TDP2O95551 362 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 ATF7P17544 494 aaPredicted RBP16.86■□□□□ 0.29
RNF40-209ENST00000566703 KCNC3Q14003 757 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 NPY5RQ15761 445 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 ZNF598Q86UK7 904 aaKnown RBP16.86■□□□□ 0.29
RNF40-209ENST00000566703 NLRP7Q8WX94 980 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 FAM20AQ96MK3 541 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 SCLT1Q96NL6 688 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 PHF7Q9BWX1 381 aaPredicted RBP16.86■□□□□ 0.29
RNF40-209ENST00000566703 PDRG1Q9NUG6 133 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 SPG21Q9NZD8 308 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 PCDHGC5Q9Y5F6 944 aa16.86■□□□□ 0.29
RNF40-209ENST00000566703 CDKL5O76039 1030 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 SRGAP2BP0DMP2 458 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 SKIP12755 728 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 PSMC5P62195 406 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 CBX2Q14781 532 aaPredicted RBP16.85■□□□□ 0.29
RNF40-209ENST00000566703 MTERF2Q49AM1 385 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 PPP4R3AQ6IN85 833 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 ZNF410Q86VK4 478 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 EXOC8Q8IYI6 725 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 SUSD6Q92537 303 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 EDAQ92838 391 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 GJA10Q969M2 543 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 HCSTQ9UBK5 93 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 SEPT9Q9UHD8 586 aaPredicted RBP16.85■□□□□ 0.29
RNF40-209ENST00000566703 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
RNF40-209ENST00000566703 BARX2Q9UMQ3 279 aaPredicted RBP16.85■□□□□ 0.29
RNF40-209ENST00000566703 USP15Q9Y4E8 981 aaPredicted RBP16.85■□□□□ 0.29
RNF40-209ENST00000566703 ATG2AQ2TAZ0 1938 aa16.85■□□□□ 0.29
RNF40-209ENST00000566703 FNDC1Q4ZHG4 1894 aaPredicted RBP16.84■□□□□ 0.29
RNF40-209ENST00000566703 DDX11L8A8MPP1 907 aa16.84■□□□□ 0.29
RNF40-209ENST00000566703 MAFO75444 373 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms