RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 BSNDQ8WZ55 320 aa9.08□□□□□ -0.96
CDH13-208ENST00000566333 TMEM143Q96AN5 459 aa9.08□□□□□ -0.96
CDH13-208ENST00000566333 DHX58Q96C10 678 aa9.08□□□□□ -0.96
CDH13-208ENST00000566333 CCDC43Q96MW1 224 aaKnown RBP9.08□□□□□ -0.96
CDH13-208ENST00000566333 PANK2Q9BZ23 570 aa9.08□□□□□ -0.96
CDH13-208ENST00000566333 CCDC39Q9UFE4 941 aa9.08□□□□□ -0.96
CDH13-208ENST00000566333 ZMYND8Q9ULU4 1186 aaPredicted RBP9.08□□□□□ -0.96
CDH13-208ENST00000566333 TTC3P53804 2025 aa9.08□□□□□ -0.96
CDH13-208ENST00000566333 RALGAPA2Q2PPJ7 1873 aa9.08□□□□□ -0.96
CDH13-208ENST00000566333 KIAA1671Q9BY89 1806 aa9.08□□□□□ -0.96
CDH13-208ENST00000566333 ADGRA3Q8IWK6 1321 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 ANK1P16157 1881 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 NPHP3-ACAD11A0A0J9YXS1 232 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 MYMKA6NI61 221 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 RSPH10B2B2RC85 870 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 POLR2DO15514 142 aaKnown RBP9.07□□□□□ -0.96
CDH13-208ENST00000566333 HIP1RO75146 1068 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 TIMP1P01033 207 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 CHRNA1P02708 482 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 SSBP05455 408 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDH13-208ENST00000566333 RSPH10BP0C881 870 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 SELPP16109 830 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 SYN1P17600 705 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 LIG1P18858 919 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 GLRA2P23416 452 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 ARL2P36404 184 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 GPC3P51654 580 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 CACNB1Q02641 598 aaPredicted RBP9.07□□□□□ -0.96
CDH13-208ENST00000566333 BFSP2Q13515 415 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 SNW1Q13573 536 aaKnown RBP9.07□□□□□ -0.96
CDH13-208ENST00000566333 CAPSQ13938 189 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 KIZQ2M2Z5 673 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 LRRC8DQ7L1W4 858 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 GPBP1Q86WP2 473 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 KSR1Q8IVT5 923 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 CCDC155Q8N6L0 562 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 RETREG2Q8NC44 543 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 MCPH1Q8NEM0 835 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 TMEM40Q8WWA1 233 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 DNAJC19Q96DA6 116 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 SCLYQ96I15 445 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 PPP1R16BQ96T49 567 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 JPH2Q9BR39 696 aaPredicted RBP9.07□□□□□ -0.96
CDH13-208ENST00000566333 REEP2Q9BRK0 252 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 POLR3FQ9H1D9 316 aaPredicted RBP9.07□□□□□ -0.96
CDH13-208ENST00000566333 TNMDQ9H2S6 317 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 ADAMTS10Q9H324 1103 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 SUGCTQ9HAC7 445 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 CDHR5Q9HBB8 845 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 KBTBD4Q9NVX7 518 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 FAM13BQ9NYF5 915 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 KCND2Q9NZV8 630 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 AKT3Q9Y243 479 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 COL4A3BPQ9Y5P4 624 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 CDY2AQ9Y6F7 541 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 CITO14578 2027 aa9.07□□□□□ -0.96
CDH13-208ENST00000566333 FNDC1Q4ZHG4 1894 aaPredicted RBP9.06□□□□□ -0.96
CDH13-208ENST00000566333 NBNO60934 754 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 CXCL10P02778 98 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 RPLP2P05387 115 aaKnown RBP9.06□□□□□ -0.96
CDH13-208ENST00000566333 IQCF3P0C7M6 154 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 CASP1P29466 404 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 SYKP43405 635 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 ZNF131P52739 623 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 CCL23P55773 120 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 FAM160A1Q05DH4 1040 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 RAD51AP2Q09MP3 1159 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 LAMTOR4Q0VGL1 99 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 CSPP1Q1MSJ5 1256 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 TCTN1Q2MV58 587 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 LONRF3Q496Y0 759 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 TPRNQ4KMQ1 711 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 FBXO47Q5MNV8 452 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 IER5Q5VY09 327 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 CDCA2Q69YH5 1023 aaPredicted RBP9.06□□□□□ -0.96
CDH13-208ENST00000566333 MFSD5Q6N075 450 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 EXOC8Q8IYI6 725 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 GRAMD1CQ8IYS0 662 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 IQUBQ8NA54 791 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 PRPF31Q8WWY3 499 aaKnown RBP9.06□□□□□ -0.96
CDH13-208ENST00000566333 PSPC1Q8WXF1 523 aaKnown RBP9.06□□□□□ -0.96
CDH13-208ENST00000566333 DPF3Q92784 378 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 ZNF668Q96K58 619 aaPredicted RBP9.06□□□□□ -0.96
CDH13-208ENST00000566333 FIZ1Q96SL8 496 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 MAP7D2Q96T17 732 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 OSMRQ99650 979 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 TRIM9Q9C026 710 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 CUEDC2Q9H467 287 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 MAGEF1Q9HAY2 307 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 POLD4Q9HCU8 107 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 LMBRD1Q9NUN5 540 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 SUCLA2Q9P2R7 463 aaPredicted RBP9.06□□□□□ -0.96
CDH13-208ENST00000566333 SERTAD1Q9UHV2 236 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 TRPV2Q9Y5S1 764 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 TRANK1O15050 2925 aa9.06□□□□□ -0.96
CDH13-208ENST00000566333 NLRC5Q86WI3 1866 aa9.05□□□□□ -0.96
CDH13-208ENST00000566333 A0A087WZ62 844 aa9.05□□□□□ -0.96
CDH13-208ENST00000566333 FRMD3A2A2Y4 597 aa9.05□□□□□ -0.96
CDH13-208ENST00000566333 H0YGN5 161 aa9.05□□□□□ -0.96
CDH13-208ENST00000566333 PRPF40AO75400 957 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms