RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 TARBP2Q15633 366 aaKnown RBP10.84□□□□□ -0.67
SF3B3-207ENST00000566095 PLA2G4FQ68DD2 849 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 FBXO46Q6PJ61 603 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-207ENST00000566095 HS2ST1Q7LGA3 356 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 TRMT1LQ7Z2T5 733 aaKnown RBP10.84□□□□□ -0.67
SF3B3-207ENST00000566095 RSPH3Q86UC2 560 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 ADSSL1Q8N142 457 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 C7orf31Q8N865 590 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 TMEM174Q8WUU8 243 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 SPIRE2Q8WWL2 714 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 PSPC1Q8WXF1 523 aaKnown RBP10.84□□□□□ -0.67
SF3B3-207ENST00000566095 KCNN1Q92952 543 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 IQCDQ96DY2 449 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 PCYT2Q99447 389 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 C16orf70Q9BSU1 422 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 DHX33Q9H6R0 707 aaKnown RBP10.84□□□□□ -0.67
SF3B3-207ENST00000566095 TMEM206Q9H813 350 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 PTCH2Q9Y6C5 1203 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 SYNRGQ9UMZ2 1314 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 K7ENM7 598 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 CALUO43852 315 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-207ENST00000566095 GCNT3O95395 438 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 ZNF286BP0CG31 522 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 RPL13P26373 211 aaKnown RBP10.83□□□□□ -0.68
SF3B3-207ENST00000566095 EEF1GP26641 437 aaKnown RBP10.83□□□□□ -0.68
SF3B3-207ENST00000566095 NAMPTP43490 491 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 PSEN2P49810 448 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 ZNF75DP51815 510 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 EFNA5P52803 228 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 NPEPPSP55786 919 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 GSDMDP57764 484 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 PTPN11Q06124 597 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-207ENST00000566095 STRN3Q13033 797 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 KIAA0753Q2KHM9 967 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 ARSHQ5FYA8 562 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-207ENST00000566095 SFR1Q86XK3 245 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 ZBTB8OSQ8IWT0 167 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 AOPEPQ8N6M6 819 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 TRPV1Q8NER1 839 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 DEPTORQ8TB45 409 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 TRIM5Q9C035 493 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.83□□□□□ -0.68
SF3B3-207ENST00000566095 ST6GALNAC4Q9H4F1 302 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 BCAS3Q9H6U6 928 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 TSKSQ9UJT2 592 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 DOCK5Q9H7D0 1870 aa10.83□□□□□ -0.68
SF3B3-207ENST00000566095 C17orf102A2RUQ5 167 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 CCDC169A6NNP5 214 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 M0QZ92 97 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 STBD1O95210 358 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 HSPA8P11142 646 aaKnown RBP10.82□□□□□ -0.68
SF3B3-207ENST00000566095 CCNE1P24864 410 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 CCND3P30281 292 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-207ENST00000566095 RAD51AP2Q09MP3 1159 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 GRIK4Q16099 956 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 CDKAL1Q5VV42 579 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 CENPPQ6IPU0 288 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 TAF2Q6P1X5 1199 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 APBB1IPQ7Z5R6 666 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-207ENST00000566095 TRIM50Q86XT4 487 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 ERCC4Q92889 916 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-207ENST00000566095 GLT1D1Q96MS3 346 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 ACCSQ96QU6 501 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 POLR3FQ9H1D9 316 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-207ENST00000566095 THAP9Q9H5L6 903 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 SLC39A2Q9NP94 309 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 KMT5AQ9NQR1 393 aa10.82□□□□□ -0.68
SF3B3-207ENST00000566095 MAGEC2Q9UBF1 373 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-207ENST00000566095 ZBTB39O15060 712 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 ADAMTS4O75173 837 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 GNA14O95837 355 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 PGK1P00558 417 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-207ENST00000566095 HSPA1AP0DMV8 641 aaKnown RBP10.81□□□□□ -0.68
SF3B3-207ENST00000566095 HSPA1BP0DMV9 641 aaKnown RBP10.81□□□□□ -0.68
SF3B3-207ENST00000566095 SMIM10L2AP0DMW4 78 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 SMIM10L2BP0DMW5 78 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 INSRRP14616 1297 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 ATP4AP20648 1035 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 CASP1P29466 404 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 PHKA2P46019 1235 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 KCNJ6P48051 423 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 PURAQ00577 322 aaKnown RBP10.81□□□□□ -0.68
SF3B3-207ENST00000566095 POU5F1BQ06416 359 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 NCBP1Q09161 790 aaKnown RBP10.81□□□□□ -0.68
SF3B3-207ENST00000566095 PCBP1Q15365 356 aaKnown RBP eCLIP10.81□□□□□ -0.68
SF3B3-207ENST00000566095 NFIL3Q16649 462 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 ISM2Q6H9L7 571 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 KLHL10Q6JEL2 608 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 EFCAB12Q6NXP0 572 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 NFRKBQ6P4R8 1299 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 ZSCAN30Q86W11 494 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 SYCP3Q8IZU3 236 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 NME8Q8N427 588 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 METTL13Q8N6R0 699 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 KLHDC9Q8NEP7 349 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 LRRC15Q8TF66 581 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 NELFBQ8WX92 580 aa10.81□□□□□ -0.68
SF3B3-207ENST00000566095 P2RX5Q93086 422 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms