RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 BMPR1AP36894 532 aa28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 KCNQ1P51787 676 aa28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 DSC3Q14574 896 aa28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 SAFBQ15424 915 aaKnown RBP eCLIP28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 PTPROQ16827 1216 aa28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 SLC24A5Q71RS6 500 aa28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 SYMPKQ92797 1274 aaKnown RBP28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 CYP26B1Q9NR63 512 aa28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 SH2B1Q9NRF2 756 aaPredicted RBP28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 BMP2KQ9NSY1 1161 aaPredicted RBP28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 PCDHB7Q9Y5E2 793 aa28.34■■■□□ 2.13
AC009041.3-201ENST00000564390 CTTNQ14247 550 aaKnown RBP28.33■■■□□ 2.13
AC009041.3-201ENST00000564390 C11orf84Q9BUA3 381 aaPredicted RBP28.33■■■□□ 2.13
AC009041.3-201ENST00000564390 RWDD3Q9Y3V2 267 aa28.33■■■□□ 2.13
AC009041.3-201ENST00000564390 C5orf67F2Z3F1 127 aa28.32■■■□□ 2.12
AC009041.3-201ENST00000564390 GRM6O15303 877 aa28.32■■■□□ 2.12
AC009041.3-201ENST00000564390 MAFO75444 373 aaPredicted RBP28.32■■■□□ 2.12
AC009041.3-201ENST00000564390 IL27Q8NEV9 243 aa28.32■■■□□ 2.12
AC009041.3-201ENST00000564390 HLA-CQ95604 372 aa28.32■■■□□ 2.12
AC009041.3-201ENST00000564390 CEP170P1Q96L14 293 aa28.32■■■□□ 2.12
AC009041.3-201ENST00000564390 SUCLA2Q9P2R7 463 aaPredicted RBP28.32■■■□□ 2.12
AC009041.3-201ENST00000564390 A0A087WZ62 844 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 DKC1O60832 514 aaKnown RBP eCLIP28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 FGFR1P11362 822 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 MCM7P33993 719 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 TXKP42681 527 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 DNM2P50570 870 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 HMGN5P82970 282 aaKnown RBP28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 FAM102BQ5T8I3 360 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 RHPN2Q8IUC4 686 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 KSR1Q8IVT5 923 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 ZNF710Q8N1W2 664 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 ADAMTS19Q8TE59 1207 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 FDXACB1Q9BRP7 624 aaPredicted RBP28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 TMEM60Q9H2L4 133 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 TTC12Q9H892 705 aaPredicted RBP28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 HCSTQ9UBK5 93 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 COG5Q9UP83 839 aa28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 FNDC1Q4ZHG4 1894 aaPredicted RBP28.31■■■□□ 2.12
AC009041.3-201ENST00000564390 TBKBP1A7MCY6 615 aa28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 ZBTB39O15060 712 aa28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 RB1P06400 928 aa28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 YWHABP31946 246 aaKnown RBP28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 RABEP1Q15276 862 aa28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 TIGD5Q53EQ6 642 aa28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 C4orf19Q8IY42 314 aa28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 FAM184AQ8NB25 1140 aa28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 NLRP4Q96MN2 994 aa28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 EIF2AK1Q9BQI3 630 aaKnown RBP28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 PCDHA12Q9UN75 941 aa28.3■■■□□ 2.12
AC009041.3-201ENST00000564390 POLGP54098 1239 aaPredicted RBP28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 AAK1Q2M2I8 961 aa28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 TPH2Q8IWU9 490 aa28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 SLC7A3Q8WY07 619 aa28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 MTMR9Q96QG7 549 aa28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 GCOM2Q9BZD3 368 aaPredicted RBP28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 ZSWIM4Q9H7M6 989 aa28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 ATP6V0A4Q9HBG4 840 aa28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 ALG13Q9NP73 1137 aaKnown RBP28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 TMEM161AQ9NX61 479 aa28.29■■■□□ 2.12
AC009041.3-201ENST00000564390 ZSCAN20P17040 1043 aaPredicted RBP28.28■■■□□ 2.12
AC009041.3-201ENST00000564390 TCEAL5Q5H9L2 206 aa28.28■■■□□ 2.12
AC009041.3-201ENST00000564390 FAM43BQ6ZT52 329 aaPredicted RBP28.28■■■□□ 2.12
AC009041.3-201ENST00000564390 FBXO18Q8NFZ0 1043 aa28.28■■■□□ 2.12
AC009041.3-201ENST00000564390 TMEM143Q96AN5 459 aa28.28■■■□□ 2.12
AC009041.3-201ENST00000564390 JPH2Q9BR39 696 aaPredicted RBP28.28■■■□□ 2.12
AC009041.3-201ENST00000564390 POTEMA6NI47 508 aa28.27■■■□□ 2.12
AC009041.3-201ENST00000564390 SLITRK3O94933 977 aa28.27■■■□□ 2.12
AC009041.3-201ENST00000564390 FAM189BP81408 668 aa28.27■■■□□ 2.12
AC009041.3-201ENST00000564390 XKR9Q5GH70 373 aa28.27■■■□□ 2.12
AC009041.3-201ENST00000564390 RNF169Q8NCN4 708 aa28.27■■■□□ 2.12
AC009041.3-201ENST00000564390 NECAB3Q96P71 396 aaPredicted RBP28.27■■■□□ 2.12
AC009041.3-201ENST00000564390 DHX33Q9H6R0 707 aaKnown RBP28.27■■■□□ 2.12
AC009041.3-201ENST00000564390 UBE2ZQ9H832 354 aaPredicted RBP28.27■■■□□ 2.12
AC009041.3-201ENST00000564390 TCF20Q9UGU0 1960 aaKnown RBP28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 BMP1P13497 986 aa28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 GNL2Q13823 731 aaKnown RBP28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 EMC2Q15006 297 aa28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 SPOUT1Q5T280 376 aaKnown RBP28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 ZNF410Q86VK4 478 aa28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 PLVAPQ9BX97 442 aa28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 FOXP1Q9H334 677 aaPredicted RBP28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 NSUN3Q9H649 340 aaKnown RBP28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 UPF2Q9HAU5 1272 aaKnown RBP28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 RNF19AQ9NV58 838 aa28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 RNF216Q9NWF9 866 aaPredicted RBP28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 COL4A3BPQ9Y5P4 624 aa28.26■■■□□ 2.11
AC009041.3-201ENST00000564390 ST18O60284 1047 aa28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 CD2BP2O95400 341 aaKnown RBP28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 ITGB1P05556 798 aa28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 RFC5P40937 340 aa28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 ZNF174Q15697 407 aa28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 OTUD6AQ7L8S5 288 aa28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 ECHDC2Q86YB7 292 aa28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 KLHL23Q8NBE8 558 aa28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 UHRF1Q96T88 793 aaPredicted RBP28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 ELAC1Q9H777 363 aaKnown RBP28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 PLAGL2Q9UPG8 496 aa28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 PLXNA4Q9HCM2 1894 aa28.25■■■□□ 2.11
AC009041.3-201ENST00000564390 SFPQP23246 707 aaKnown RBP eCLIP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms