RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 APOBRQ0VD83 1088 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 LAMC2Q13753 1193 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 DHX34Q14147 1143 aaKnown RBP6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 CASP8Q14790 479 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 ANO4Q32M45 955 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 C6orf183Q5T699 404 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 LPCAT2Q7L5N7 544 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 RHOT2Q8IXI1 618 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 HACE1Q8IYU2 909 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 RASEFQ8IZ41 740 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 NSUN7Q8NE18 718 aaKnown RBP6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 DDHD1Q8NEL9 900 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 FNIP1Q8TF40 1166 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 ATL1Q8WXF7 558 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 ARL8AQ96BM9 186 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 FAM167AQ96KS9 214 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 SLC39A1Q9NY26 324 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 GGA2Q9UJY4 613 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 CBY1Q9Y3M2 126 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 SLC4A7Q9Y6M7 1214 aa6.38□□□□□ -1.39
TUBGCP4-207ENST00000563963 ANKRD36BQ8N2N9 1353 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 A0A1B0GVG6 124 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 SCAMP3O14828 347 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 KRT6AP02538 564 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 KRT6BP04259 564 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 GSDMDP57764 484 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 RAC1P63000 192 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 MDM2Q00987 491 aaPredicted RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 PPP2R3AQ06190 1150 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 CSTF3Q12996 717 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 TRIM28Q13263 835 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 ARL13BQ3SXY8 428 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 UTP15Q8TED0 518 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 GOLPH3LQ9H4A5 285 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 SLC40A1Q9NP59 571 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.37□□□□□ -1.395e-6■■□□□ 11.4
TUBGCP4-207ENST00000563963 PDP2Q9P2J9 529 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 EPS15L1Q9UBC2 864 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 ATP6V1HQ9UI12 483 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 L1RE1Q9UN81 338 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 ZNF521Q96K83 1311 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 CLRN2A0PK11 232 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 K7ENM7 598 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 MATN2O00339 956 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 MCF2LO15068 1137 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 APBB3O95704 486 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 SSBP05455 408 aaKnown RBP eCLIP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 ATF6P18850 670 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 IFNA8P32881 189 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 SEPHS1P49903 392 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 VCPP55072 806 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 MVPQ14764 893 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 NCAPH2Q6IBW4 605 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 PRPF40BQ6NWY9 871 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 FAM47EQ6ZV65 393 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 AKAP14Q86UN6 197 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 CCDC25Q86WR0 208 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 BCAS4Q8TDM0 211 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 NSMCE3Q96MG7 304 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 KLHL4Q9C0H6 718 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 NCOR1P1Q9H4R4 102 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 NEK6Q9HC98 313 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 ATP8A2Q9NTI2 1148 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 ORC3Q9UBD5 711 aaPredicted RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 PRAG1Q86YV5 1406 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 JCADQ9P266 1359 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 EFCAB6Q5THR3 1501 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 EFCAB8A8MWE9 144 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 STK25O00506 426 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 SPTLC1O15269 473 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 ALAS2P22557 587 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 CFL1P23528 166 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 PPP1R2P41236 205 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 SARSP49591 514 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 GPR162Q16538 588 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 MOGQ16653 247 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 FAM209AQ5JX71 171 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 PPP1R2P3Q6NXS1 205 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 CYB5D1Q6P9G0 228 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 CRELD2Q6UXH1 353 aaPredicted RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 ENAHQ8N8S7 591 aaPredicted RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 CALML6Q8TD86 181 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 INTS12Q96CB8 462 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 CARD9Q9H257 536 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 ATP13A1Q9HD20 1204 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 CABP1Q9NZU7 370 aa6.37□□□□□ -1.39
TUBGCP4-207ENST00000563963 SH3D21A4FU49 640 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 A6NHS1 94 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 GOLGA8RI6L899 631 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 N4BP3O15049 544 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 ATP5HO75947 161 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 LMNAP02545 664 aaKnown RBP6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 LINGO3P0C6S8 592 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 RPS2P15880 293 aaKnown RBP6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 PHBP35232 272 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 SOX5P35711 763 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 ZNF76P36508 570 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 HADHAP40939 763 aa6.36□□□□□ -1.39
TUBGCP4-207ENST00000563963 BAG6P46379 1132 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms