RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 AGBL1Q96MI9 1066 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 ACCSQ96QU6 501 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 STK33Q9BYT3 514 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 GLIS2Q9BZE0 524 aaPredicted RBP8.83□□□□□ -1
SMAD3-212ENST00000559937 AS3MTQ9HBK9 375 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 KCNH7Q9NS40 1196 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 TCEAL9Q9UHQ7 104 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 SALL4Q9UJQ4 1053 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 USP20Q9Y2K6 914 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 CTDP1Q9Y5B0 961 aaPredicted RBP8.83□□□□□ -1
SMAD3-212ENST00000559937 PTPRFP10586 1907 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 DOCK5Q9H7D0 1870 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 NCANO14594 1321 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 PAPPA2Q9BXP8 1791 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 NFIBO00712 420 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 ZNF185O15231 689 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 MAFGO15525 162 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 DKC1O60832 514 aaKnown RBP eCLIP8.82□□□□□ -13e-14■■□□□ 13.6
SMAD3-212ENST00000559937 ACTN1P12814 892 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 KRT13P13646 458 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 PLS3P13797 630 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 ERCC3P19447 782 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 LMNB1P20700 586 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 SOX5P35711 763 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 RARRES1P49788 294 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 MYL7Q01449 175 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 PTK2Q05397 1052 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 ENPEPQ07075 957 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 C2orf54Q08AI8 447 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 BFSP1Q12934 665 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 NNTQ13423 1086 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 PGM5Q15124 567 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 ZC2HC1CQ53FD0 456 aaPredicted RBP8.82□□□□□ -1
SMAD3-212ENST00000559937 HSP90B2PQ58FF3 399 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 NFRKBQ6P4R8 1299 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 INTS8Q75QN2 995 aaKnown RBP8.82□□□□□ -1
SMAD3-212ENST00000559937 ZNF571Q7Z3V5 609 aaPredicted RBP8.82□□□□□ -1
SMAD3-212ENST00000559937 CDAN1Q8IWY9 1227 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 BANK1Q8NDB2 785 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 COG1Q8WTW3 980 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 EXOC4Q96A65 974 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 PBKQ96KB5 322 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 C12orf42Q96LP6 360 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 DRC1Q96MC2 740 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 SENP7Q9BQF6 1050 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.82□□□□□ -1
SMAD3-212ENST00000559937 ST7Q9NRC1 585 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 COL20A1Q9P218 1284 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 WRAP73Q9P2S5 460 aaPredicted RBP8.82□□□□□ -1
SMAD3-212ENST00000559937 ADAMTS1Q9UHI8 967 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 ZNF112Q9UJU3 913 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 NAGPAQ9UK23 515 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 PRDM4Q9UKN5 801 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 ZHX2Q9Y6X8 837 aa8.82□□□□□ -1
SMAD3-212ENST00000559937 ZNFX1Q9P2E3 1918 aaKnown RBP8.82□□□□□ -1
SMAD3-212ENST00000559937 MYPNQ86TC9 1320 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 SFI1A8K8P3 1242 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 K7ENM7 598 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 BUB1O43683 1085 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 EXOC3O60645 756 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 PALMO75781 387 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 H2AFZP0C0S5 128 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 ALAS1P13196 640 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 VCAM1P19320 739 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 CYP2C19P33261 490 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 ABCD1P33897 745 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 EPHB4P54760 987 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 NCKAP1LP55160 1127 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 NAP1L1P55209 391 aaKnown RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 PSMC5P62195 406 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 MRPS9P82933 396 aaKnown RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 GTF2BQ00403 316 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 KCNA1Q09470 495 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 CETN1Q12798 172 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 ITGB3BPQ13352 177 aaPredicted RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 MTMR1Q13613 665 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 ZNF746Q6NUN9 644 aaPredicted RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 ALKBH5Q6P6C2 394 aaKnown RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 H2AFVQ71UI9 128 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 SLFN11Q7Z7L1 901 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 SCYL3Q8IZE3 742 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 SYCP3Q8IZU3 236 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 SYCE1Q8N0S2 351 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 EIF1ADQ8N9N8 165 aaKnown RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 IL31RAQ8NI17 732 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 SLC30A5Q8TAD4 765 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 RBM46Q8TBY0 533 aaKnown RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 AENQ8WTP8 325 aaKnown RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.81□□□□□ -1
SMAD3-212ENST00000559937 TAF4BQ92750 862 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 GPRASP2Q96D09 838 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 CCDC43Q96MW1 224 aaKnown RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 INPP4AQ96PE3 977 aaPredicted RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 PDCD2LQ9BRP1 358 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 SYT11Q9BT88 431 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 SELENOOQ9BVL4 669 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 ZMYND15Q9H091 742 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 INTS2Q9H0H0 1204 aaKnown RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 RAVER2Q9HCJ3 691 aaKnown RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 PDE11AQ9HCR9 933 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms