RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SERINC5Q86VE9 423 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 CCDC155Q8N6L0 562 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 NSUN7Q8NE18 718 aaKnown RBP6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 HERVK_113Q902F9 699 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 UIMC1Q96RL1 719 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 PHF20Q9BVI0 1012 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 SETD4Q9NVD3 440 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZNF215Q9UL58 517 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 PCDHA4Q9UN74 947 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 KCNJ14Q9UNX9 436 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 DNMT3AQ9Y6K1 912 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 PTPRSQ13332 1948 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 WDR81Q562E7 1941 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 IPO5O00410 1097 aaKnown RBP6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 TREHO43280 583 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 JAK2O60674 1132 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 FGBP02675 491 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 SELPP16109 830 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 IGFBP4P22692 258 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 MARK3P27448 753 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 RFC2P35250 354 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 EPHA4P54764 986 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 SETQ01105 290 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 CBLBQ13191 982 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 MBTPS1Q14703 1052 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 PRR16Q569H4 304 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZNF618Q5T7W0 954 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 LRRC8DQ7L1W4 858 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 OTOP2Q7RTS6 562 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 BLIDQ8IZY5 108 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 FAM177A1Q8N128 213 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 DEFB123Q8N688 67 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 TBCKQ8TEA7 893 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 AFAP1L1Q8TED9 768 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 LMBR1Q8WVP7 490 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 ATP6V0A1Q93050 837 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 SDF4Q9BRK5 362 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 ORC3Q9UBD5 711 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 WASF2Q9Y6W5 498 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 SIP14410 1827 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 TRANK1O15050 2925 aa6.83□□□□□ -1.32
CTDSPL2-204ENST00000558966 PRUNE2Q8WUY3 3088 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 MYH9P35579 1960 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 IGKV6D-21A0A0A0MT36 114 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 GRXCR1A8MXD5 290 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 DDX39AO00148 427 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 NBNO60934 754 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 PFKMP08237 780 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 TCTN1Q2MV58 587 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 GALNT17Q6IS24 598 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 ABHD15Q6UXT9 468 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZNF598Q86UK7 904 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 CCDC60Q8IWA6 550 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 RPUSD2Q8IZ73 545 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 GLG1Q92896 1179 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZNF577Q9BSK1 485 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 C22orf23Q9BZE7 217 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 TTYH1Q9H313 450 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 SMARCAD1Q9H4L7 1026 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 MTMR10Q9NXD2 777 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 ERAP1Q9NZ08 941 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 MICAL3Q7RTP6 2002 aa6.82□□□□□ -1.32
CTDSPL2-204ENST00000558966 A0A0C4DFX4 3053 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 MSH4O15457 936 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 ICMTO60725 284 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 TDP2O95551 362 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 IL2RAP01589 272 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 CXCL10P02778 98 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 THPOP40225 353 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 USP11P51784 963 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 PPFIA1Q13136 1202 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 PLCB4Q15147 1175 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 NONOQ15233 471 aaKnown RBP eCLIP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 GRIK4Q16099 956 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 MARCH8Q5T0T0 291 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 RUFY4Q6ZNE9 571 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 PLPPR4Q7Z2D5 763 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 GLYCTKQ8IVS8 523 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 GJA10Q969M2 543 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZBTB10Q96DT7 871 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 PBX4Q9BYU1 374 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 OSBPL7Q9BZF2 842 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 PRKD2Q9BZL6 878 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 AZI2Q9H6S1 392 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 NRCAMQ92823 1304 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 CYP3A7-CYP3A51PA0A087WV96 503 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 A0A1W2PRU2 124 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 MBLAC1A4D2B0 266 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 J3QL48 77 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 PARNO95453 639 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 CTSHP09668 335 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 GNAT1P11488 350 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 INSRRP14616 1297 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 XBP1P17861 261 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 ATP4AP20648 1035 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 CYP3A7P24462 503 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 STAT5BP51692 787 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms