RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 NIFKQ9BYG3 293 aaKnown RBP17.37■□□□□ 0.37
LINC01220-201ENST00000558575 NRBP2Q9NSY0 501 aa17.37■□□□□ 0.37
LINC01220-201ENST00000558575 RBM19Q9Y4C8 960 aaKnown RBP17.37■□□□□ 0.37
LINC01220-201ENST00000558575 RRN3P2A6NIE6 340 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 IRS1P35568 1242 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 PTK7Q13308 1070 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 FOXD4L6Q3SYB3 417 aaPredicted RBP17.36■□□□□ 0.37
LINC01220-201ENST00000558575 XKR3Q5GH77 459 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 ZNF484Q5JVG2 852 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 IER5LQ5T953 404 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 TRAF7Q6Q0C0 670 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 FOXD4L3Q6VB84 417 aaPredicted RBP17.36■□□□□ 0.37
LINC01220-201ENST00000558575 TPH2Q8IWU9 490 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 ZNF579Q8NAF0 562 aaKnown RBP17.36■□□□□ 0.37
LINC01220-201ENST00000558575 RETREG2Q8NC44 543 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 MFSD14AQ96MC6 490 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 SH2D3AQ9BRG2 576 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 LXNQ9BS40 222 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 MMTAG2Q9BU76 263 aaKnown RBP17.36■□□□□ 0.37
LINC01220-201ENST00000558575 DAXXQ9UER7 740 aaPredicted RBP17.36■□□□□ 0.37
LINC01220-201ENST00000558575 LRWD1Q9UFC0 647 aa17.36■□□□□ 0.37
LINC01220-201ENST00000558575 FAM186AA6NE01 2351 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 VWA3AA6NCI4 1184 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 DDX11L8A8MPP1 907 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 LYPLA2O95372 231 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 GJB5O95377 273 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 GNAT1P11488 350 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 KLRC1P26715 233 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 MARCKSP29966 332 aaPredicted RBP17.35■□□□□ 0.37
LINC01220-201ENST00000558575 NASPP49321 788 aaPredicted RBP17.35■□□□□ 0.37
LINC01220-201ENST00000558575 RBL2Q08999 1139 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 SLC39A14Q15043 492 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 PUS10Q3MIT2 529 aaKnown RBP17.35■□□□□ 0.37
LINC01220-201ENST00000558575 MTHFD1LQ6UB35 978 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 FAM167AQ96KS9 214 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 ZBED2Q9BTP6 218 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 POLR3CQ9BUI4 534 aaPredicted RBP17.35■□□□□ 0.37
LINC01220-201ENST00000558575 ZSWIM4Q9H7M6 989 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 NOD1Q9Y239 953 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 COL4A6Q14031 1691 aa17.35■□□□□ 0.37
LINC01220-201ENST00000558575 C22orf31O95567 290 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 BMP15O95972 392 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 COL1A2P08123 1366 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 RPA1P27694 616 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 NPEPPSP55786 919 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 TMEM266Q2M3C6 531 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 PLA2G4FQ68DD2 849 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 LINC00301Q8NCQ3 95 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 TNPO1Q92973 898 aaKnown RBP17.34■□□□□ 0.37
LINC01220-201ENST00000558575 C17orf80Q9BSJ5 609 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 TUFT1Q9NNX1 390 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 MUTYHQ9UIF7 546 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 TUBE1Q9UJT0 475 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 FBXO2Q9UK22 296 aaPredicted RBP17.34■□□□□ 0.37
LINC01220-201ENST00000558575 PCDHA2Q9Y5H9 948 aa17.34■□□□□ 0.37
LINC01220-201ENST00000558575 MORC2Q9Y6X9 1032 aaPredicted RBP17.34■□□□□ 0.37
LINC01220-201ENST00000558575 CKBP12277 381 aa17.33■□□□□ 0.36
LINC01220-201ENST00000558575 YWHABP31946 246 aaKnown RBP17.33■□□□□ 0.36
LINC01220-201ENST00000558575 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.36
LINC01220-201ENST00000558575 DNM1Q05193 864 aaKnown RBP17.33■□□□□ 0.36
LINC01220-201ENST00000558575 TCF15Q12870 199 aa17.33■□□□□ 0.36
LINC01220-201ENST00000558575 ADHFE1Q8IWW8 467 aa17.33■□□□□ 0.36
LINC01220-201ENST00000558575 LINC01465Q8N7H1 131 aa17.33■□□□□ 0.36
LINC01220-201ENST00000558575 ZNF396Q96N95 335 aaPredicted RBP17.33■□□□□ 0.36
LINC01220-201ENST00000558575 RAD9AQ99638 391 aa17.33■□□□□ 0.36
LINC01220-201ENST00000558575 OSBPL7Q9BZF2 842 aa17.33■□□□□ 0.36
LINC01220-201ENST00000558575 PRKAG3Q9UGI9 489 aa17.33■□□□□ 0.36
LINC01220-201ENST00000558575 SEPT9Q9UHD8 586 aaPredicted RBP17.33■□□□□ 0.36
LINC01220-201ENST00000558575 CEP131Q9UPN4 1083 aa17.33■□□□□ 0.36
LINC01220-201ENST00000558575 SRPRBQ9Y5M8 271 aaKnown RBP17.33■□□□□ 0.36
LINC01220-201ENST00000558575 WDR81Q562E7 1941 aa17.33■□□□□ 0.36
LINC01220-201ENST00000558575 MYH9P35579 1960 aaKnown RBP17.32■□□□□ 0.36
LINC01220-201ENST00000558575 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC01220-201ENST00000558575 PTPN5P54829 565 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 MKRN4PQ13434 485 aaPredicted RBP17.32■□□□□ 0.36
LINC01220-201ENST00000558575 MBTPS1Q14703 1052 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 MTERF2Q49AM1 385 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 ZNF618Q5T7W0 954 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 FAM117BQ6P1L5 589 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 USP49Q70CQ1 688 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 RPAINQ86UA6 219 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 KIAA0319LQ8IZA0 1049 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 FBXO22Q8NEZ5 403 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 CAGE1Q8TC20 777 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 PIGOQ8TEQ8 1089 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 DNAJB3Q8WWF6 145 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 MRPL38Q96DV4 380 aaKnown RBP17.32■□□□□ 0.36
LINC01220-201ENST00000558575 CLIC6Q96NY7 704 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 PNMA5Q96PV4 448 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 CYP26B1Q9NR63 512 aa17.32■□□□□ 0.36
LINC01220-201ENST00000558575 IGKV6-21A0A0C4DH24 114 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 SMIM35A0A1B0GVV1 85 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 XRCC6P12956 609 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC01220-201ENST00000558575 THPOP40225 353 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 CCT6AP40227 531 aaKnown RBP17.31■□□□□ 0.36
LINC01220-201ENST00000558575 FOXK2Q01167 660 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 BFSP2Q13515 415 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 COL19A1Q14993 1142 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 TAF2Q6P1X5 1199 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 POTEGQ6S5H5 508 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms