RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 MRPL38Q96DV4 380 aaKnown RBP16.66■□□□□ 0.26
EFCAB11-207ENST00000555608 C8orf76Q96K31 380 aa16.66■□□□□ 0.26
EFCAB11-207ENST00000555608 RGS18Q9NS28 235 aa16.66■□□□□ 0.26
EFCAB11-207ENST00000555608 PCDHB7Q9Y5E2 793 aa16.66■□□□□ 0.26
EFCAB11-207ENST00000555608 IGKV6-21A0A0C4DH24 114 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 TBKBP1A7MCY6 615 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 GRM6O15303 877 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 NEMFO60524 1076 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 BAG4O95429 457 aaKnown RBP16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 EIF4BP23588 611 aaKnown RBP16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 EPHA7Q15375 998 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 PTPROQ16827 1216 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 FAM102BQ5T8I3 360 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 CEP170P1Q96L14 293 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 ZSCAN31Q96LW9 406 aaPredicted RBP16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 UHRF1Q96T88 793 aaPredicted RBP16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 CYP26B1Q9NR63 512 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 C1orf112Q9NSG2 853 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 RWDD3Q9Y3V2 267 aa16.65■□□□□ 0.26
EFCAB11-207ENST00000555608 A0A087WZ62 844 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 C5orf67F2Z3F1 127 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 ZBTB39O15060 712 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 MAFO75444 373 aaPredicted RBP16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 FGFR1P11362 822 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 DARSP14868 501 aaKnown RBP16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 MCM7P33993 719 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 TIGD5Q53EQ6 642 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 TCEAL5Q5H9L2 206 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 SLC24A5Q71RS6 500 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 RHPN2Q8IUC4 686 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 KSR1Q8IVT5 923 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 HLA-CQ95604 372 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 NLRP4Q96MN2 994 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 NECAB3Q96P71 396 aaPredicted RBP16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 FDXACB1Q9BRP7 624 aaPredicted RBP16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 LLPHQ9BRT6 129 aaKnown RBP16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 C11orf84Q9BUA3 381 aaPredicted RBP16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 TMEM60Q9H2L4 133 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 ALG13Q9NP73 1137 aaKnown RBP16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 SH2B1Q9NRF2 756 aaPredicted RBP16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 SUCLA2Q9P2R7 463 aaPredicted RBP16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 COG5Q9UP83 839 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 TTC28Q96AY4 2481 aa16.64■□□□□ 0.25
EFCAB11-207ENST00000555608 DKC1O60832 514 aaKnown RBP eCLIP16.63■□□□□ 0.25
EFCAB11-207ENST00000555608 YWHABP31946 246 aaKnown RBP16.63■□□□□ 0.25
EFCAB11-207ENST00000555608 TXKP42681 527 aa16.63■□□□□ 0.25
EFCAB11-207ENST00000555608 POLGP54098 1239 aaPredicted RBP16.63■□□□□ 0.25
EFCAB11-207ENST00000555608 SAFBQ15424 915 aaKnown RBP eCLIP16.63■□□□□ 0.25
EFCAB11-207ENST00000555608 C4orf19Q8IY42 314 aa16.63■□□□□ 0.25
EFCAB11-207ENST00000555608 UBE2ZQ9H832 354 aaPredicted RBP16.63■□□□□ 0.25
EFCAB11-207ENST00000555608 TTC12Q9H892 705 aaPredicted RBP16.63■□□□□ 0.25
EFCAB11-207ENST00000555608 POTEMA6NI47 508 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 RB1P06400 928 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 DNM2P50570 870 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 HMGN5P82970 282 aaKnown RBP16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 RABEP1Q15276 862 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 SPOUT1Q5T280 376 aaKnown RBP16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 TPH2Q8IWU9 490 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 FAM184AQ8NB25 1140 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 RNF169Q8NCN4 708 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 TMEM143Q96AN5 459 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 EIF2AK1Q9BQI3 630 aaKnown RBP16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 GCOM2Q9BZD3 368 aaPredicted RBP16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 NSUN3Q9H649 340 aaKnown RBP16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 ATP6V0A4Q9HBG4 840 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 RNF19AQ9NV58 838 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 TMEM161AQ9NX61 479 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 PCDHA12Q9UN75 941 aa16.62■□□□□ 0.25
EFCAB11-207ENST00000555608 SLITRK3O94933 977 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 CD2BP2O95400 341 aaKnown RBP16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 ITGB1P05556 798 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 BMP1P13497 986 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 ZSCAN20P17040 1043 aaPredicted RBP16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 DNAJB1P25685 340 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 NBR1Q14596 966 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 EMC2Q15006 297 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 AAK1Q2M2I8 961 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 ECHDC2Q86YB7 292 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 KLHL23Q8NBE8 558 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 SLC7A3Q8WY07 619 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 MTMR9Q96QG7 549 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 PLVAPQ9BX97 442 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 DHX33Q9H6R0 707 aaKnown RBP16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 COL4A3BPQ9Y5P4 624 aa16.61■□□□□ 0.25
EFCAB11-207ENST00000555608 A0A087WWV3 80 aa16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 ATF7P17544 494 aaPredicted RBP16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 KCNA5P22460 613 aa16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 FAM189BP81408 668 aa16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 GNL2Q13823 731 aaKnown RBP16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 ZNF174Q15697 407 aa16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 EP400NLQ6ZTU2 488 aa16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 ZNF410Q86VK4 478 aa16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 ZNF710Q8N1W2 664 aa16.6■□□□□ 0.25
EFCAB11-207ENST00000555608 FBXO18Q8NFZ0 1043 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms