RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 MRPL9Q9BYD2 267 aaKnown RBP17.5■□□□□ 0.39
NEDD1-207ENST00000555114 DACT1Q9NYF0 836 aa17.5■□□□□ 0.39
NEDD1-207ENST00000555114 SPG21Q9NZD8 308 aa17.5■□□□□ 0.39
NEDD1-207ENST00000555114 HCSTQ9UBK5 93 aa17.5■□□□□ 0.39
NEDD1-207ENST00000555114 TECTAO75443 2155 aa17.5■□□□□ 0.39
NEDD1-207ENST00000555114 EVPLQ92817 2033 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 PRPF3O43395 683 aaKnown RBP17.49■□□□□ 0.39
NEDD1-207ENST00000555114 CDC45O75419 566 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 SFNP31947 248 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 APOBRQ0VD83 1088 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 SMC1AQ14683 1233 aaKnown RBP17.49■□□□□ 0.39
NEDD1-207ENST00000555114 TPRNQ4KMQ1 711 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 ECHDC2Q86YB7 292 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 RNF169Q8NCN4 708 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 VN1R2Q8NFZ6 395 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 RSPH1Q8WYR4 309 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 CASD1Q96PB1 797 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 IRF2BPLQ9H1B7 796 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 DISC1Q9NRI5 854 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 NR2E1Q9Y466 385 aa17.49■□□□□ 0.39
NEDD1-207ENST00000555114 MYH9P35579 1960 aaKnown RBP17.48■□□□□ 0.39
NEDD1-207ENST00000555114 GAS7O60861 476 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 EOMESO95936 686 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 JAK3P52333 1124 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 RBM10P98175 930 aaKnown RBP17.48■□□□□ 0.39
NEDD1-207ENST00000555114 CDC42EP1Q00587 391 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 PRKCEQ02156 737 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 TBC1D8BQ0IIM8 1120 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 PTPN21Q16825 1174 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 CES5AQ6NT32 575 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 LLGL2Q6P1M3 1020 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 Q6ZUG5 572 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 LRRC71Q8N4P6 559 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 NLRP7Q8WX94 980 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 BRF1Q92994 677 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 RIT2Q99578 217 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 ADAMTS10Q9H324 1103 aa17.48■□□□□ 0.39
NEDD1-207ENST00000555114 DARSP14868 501 aaKnown RBP17.47■□□□□ 0.39
NEDD1-207ENST00000555114 CA8P35219 290 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 ALDH7A1P49419 539 aaKnown RBP17.47■□□□□ 0.39
NEDD1-207ENST00000555114 GPC3P51654 580 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 KCNC3Q14003 757 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 BLOC1S2Q6QNY1 142 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 LINC01465Q8N7H1 131 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 TMEM87AQ8NBN3 555 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 PRSS33Q8NF86 280 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 NECTIN4Q96NY8 510 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 TEKT3Q9BXF9 490 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 RNF26Q9BY78 433 aaPredicted RBP17.47■□□□□ 0.39
NEDD1-207ENST00000555114 C22orf23Q9BZE7 217 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 S1PR5Q9H228 398 aa17.47■□□□□ 0.39
NEDD1-207ENST00000555114 NID2Q14112 1375 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 A0A0U1RQF3 1178 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 HIDE1A8MVS5 230 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 CHMP2AO43633 222 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 DNM2P50570 870 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 USP11P51784 963 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 ITIH3Q06033 890 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 LRCH2Q5VUJ6 765 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 SYCE2Q6PIF2 218 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 LRRC55Q6ZSA7 311 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 CENPQQ7L2Z9 268 aaPredicted RBP17.46■□□□□ 0.39
NEDD1-207ENST00000555114 RDM1Q8NG50 284 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 TMEM169Q96HH4 297 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 JAKMIP1Q96N16 626 aaKnown RBP17.46■□□□□ 0.39
NEDD1-207ENST00000555114 APOL5Q9BWW9 433 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 GCOM2Q9BZD3 368 aaPredicted RBP17.46■□□□□ 0.39
NEDD1-207ENST00000555114 CHST12Q9NRB3 414 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 RNF19AQ9NV58 838 aa17.46■□□□□ 0.39
NEDD1-207ENST00000555114 C5orf42Q9H799 3197 aa17.45■□□□□ 0.38
NEDD1-207ENST00000555114 MSH4O15457 936 aa17.45■□□□□ 0.38
NEDD1-207ENST00000555114 SKIP12755 728 aa17.45■□□□□ 0.38
NEDD1-207ENST00000555114 IER5LQ5T953 404 aa17.45■□□□□ 0.38
NEDD1-207ENST00000555114 SLC39A11Q8N1S5 342 aa17.45■□□□□ 0.38
NEDD1-207ENST00000555114 PHKBQ93100 1093 aa17.45■□□□□ 0.38
NEDD1-207ENST00000555114 LENG9Q96B70 501 aa17.45■□□□□ 0.38
NEDD1-207ENST00000555114 SLC26A6Q9BXS9 759 aa17.45■□□□□ 0.38
NEDD1-207ENST00000555114 INO80BQ9C086 356 aaPredicted RBP17.45■□□□□ 0.38
NEDD1-207ENST00000555114 TSHZ2Q9NRE2 1034 aa17.45■□□□□ 0.38
NEDD1-207ENST00000555114 ZNF862O60290 1169 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
NEDD1-207ENST00000555114 PSMA5P28066 241 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 PBX3P40426 434 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 NUBP1P53384 320 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 NLRP5P59047 1200 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 GIT2Q14161 759 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 CLLU1OSQ5K130 101 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 MIER3Q7Z3K6 550 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 FBXL16Q8N461 479 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 MRPL43Q8N983 215 aaKnown RBP17.44■□□□□ 0.38
NEDD1-207ENST00000555114 HELQQ8TDG4 1101 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 ASIC4Q96FT7 647 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 ZNF668Q96K58 619 aaPredicted RBP17.44■□□□□ 0.38
NEDD1-207ENST00000555114 RIPOR3Q96MK2 946 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 ADAM7Q9H2U9 754 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 SH3GLB2Q9NR46 395 aa17.44■□□□□ 0.38
NEDD1-207ENST00000555114 SEPT9Q9UHD8 586 aaPredicted RBP17.44■□□□□ 0.38
NEDD1-207ENST00000555114 HCFC2Q9Y5Z7 792 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms