RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 HPSEQ9Y251 543 aa11.67□□□□□ -0.54
CCDC85C-203ENST00000554996 PCDHA11Q9Y5I1 949 aa11.67□□□□□ -0.54
CCDC85C-203ENST00000554996 RALGAPA2Q2PPJ7 1873 aa11.67□□□□□ -0.54
CCDC85C-203ENST00000554996 COL1A2P08123 1366 aa11.67□□□□□ -0.54
CCDC85C-203ENST00000554996 NRCAMQ92823 1304 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 MBLAC1A4D2B0 266 aaPredicted RBP11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 TMEM150BA6NC51 233 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 RFXAPO00287 272 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 HBP1O60381 514 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 XRCC6P12956 609 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 INSRRP14616 1297 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 PLCG1P19174 1290 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 YWHABP31946 246 aaKnown RBP11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 IGBP1P78318 339 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 PPFIA1Q13136 1202 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 KARSQ15046 597 aaKnown RBP11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 GRIK4Q16099 956 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 PLEKHG4Q58EX7 1191 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 DBF4BQ8NFT6 615 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 NACC1Q96RE7 527 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 SLC9A7Q96T83 725 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 NT5C3AQ9H0P0 336 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 GOLPH3LQ9H4A5 285 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 ANKEF1Q9NU02 776 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 BLOC1S4Q9NUP1 217 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 DDX19AQ9NUU7 478 aaKnown RBP11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 KIAA1024Q9UPX6 916 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 C5orf42Q9H799 3197 aa11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 PRRC2BQ5JSZ5 2229 aaKnown RBP11.66□□□□□ -0.54
CCDC85C-203ENST00000554996 RSPH10B2B2RC85 870 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 BAIAP3O94812 1187 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 C22orf31O95567 290 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 CHRNA1P02708 482 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 RSPH10BP0C881 870 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 ACTN1P12814 892 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 PFKFB1P16118 471 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 RARRES1P49788 294 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 TAP1Q03518 808 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 CSPP1Q1MSJ5 1256 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 LINC01465Q8N7H1 131 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 PIGOQ8TEQ8 1089 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 CYP26B1Q9NR63 512 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 MSRAQ9UJ68 235 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 TUBE1Q9UJT0 475 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 PPME1Q9Y570 386 aa11.65□□□□□ -0.54
CCDC85C-203ENST00000554996 A0A087WWV3 80 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 IGKV6-21A0A0C4DH24 114 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 RRN3P2A6NIE6 340 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 DDX11L8A8MPP1 907 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 GADD45BO75293 160 aaPredicted RBP11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 EYA4O95677 639 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 TXLNAP40222 546 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 SLC12A3P55017 1021 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 NPEPPSP55786 919 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 ZNF484Q5JVG2 852 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 FAM26DQ5JW98 314 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 PLA2G4FQ68DD2 849 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 CKAP2LQ8IYA6 745 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 ENGASEQ8NFI3 743 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 DNAJB3Q8WWF6 145 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 LINC01599Q8WXQ3 324 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 MRPS27Q92552 414 aaKnown RBP11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 RAD54LQ92698 747 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 CALML4Q96GE6 196 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 GBP4Q96PP9 640 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 DHX33Q9H6R0 707 aaKnown RBP11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 SLC28A3Q9HAS3 691 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 NRBP2Q9NSY0 501 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 STK17AQ9UEE5 414 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 KCNH3Q9ULD8 1083 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 TTC3P53804 2025 aa11.64□□□□□ -0.55
CCDC85C-203ENST00000554996 A0A1B0GVL5 298 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 E9PMD0 336 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 MAFO75444 373 aaPredicted RBP11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 GJB5O95377 273 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 GHRP10912 638 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 NDUFA8P51970 172 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 SNW1Q13573 536 aaKnown RBP11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 MTHFD1LQ6UB35 978 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 CCDC73Q6ZRK6 1079 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 OTUD6AQ7L8S5 288 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 FMR1NBQ8N0W7 255 aaPredicted RBP11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 SYT2Q8N9I0 419 aaPredicted RBP11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 FSIP1Q8NA03 581 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 PHOSPHO2Q8TCD6 241 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 CDK5RAP3Q96JB5 506 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 PLIN2Q99541 437 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 SH2D3AQ9BRG2 576 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 BHMT2Q9H2M3 363 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 CUEDC2Q9H467 287 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 XPNPEP1Q9NQW7 623 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 LMBRD1Q9NUN5 540 aa11.63□□□□□ -0.55
CCDC85C-203ENST00000554996 CCDC39Q9UFE4 941 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms