RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 METAP2P50579 478 aaKnown RBP eCLIP15.04■□□□□ -0
TUBB3-207ENST00000554927 NECTIN1Q15223 517 aa15.04■□□□□ -0
TUBB3-207ENST00000554927 CKAP2LQ8IYA6 745 aa15.04■□□□□ -0
TUBB3-207ENST00000554927 CMTR1Q8N1G2 835 aaKnown RBP15.04■□□□□ -0
TUBB3-207ENST00000554927 SLC39A11Q8N1S5 342 aa15.04■□□□□ -0
TUBB3-207ENST00000554927 CYP2W1Q8TAV3 490 aa15.04■□□□□ -0
TUBB3-207ENST00000554927 VPS13AQ96RL7 3174 aa15.04■□□□□ -0
TUBB3-207ENST00000554927 EP300Q09472 2414 aaPredicted RBP15.04■□□□□ -0
TUBB3-207ENST00000554927 LOXHD1Q8IVV2 1947 aa15.04■□□□□ -0
TUBB3-207ENST00000554927 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 NT5C1B-RDH14C9J2C7 533 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 ARP10275 920 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 EPCAMP16422 314 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 NPR3P17342 541 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 ALDH7A1P49419 539 aaKnown RBP15.03■□□□□ -0
TUBB3-207ENST00000554927 TDGQ13569 410 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 DSC3Q14574 896 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 ZNF484Q5JVG2 852 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 PDXDC2PQ6P474 469 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 TMC5Q6UXY8 1006 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 TRMT1LQ7Z2T5 733 aaKnown RBP15.03■□□□□ -0
TUBB3-207ENST00000554927 CABP7Q86V35 215 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 AUTS2Q8WXX7 1259 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 TMEM169Q96HH4 297 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 RNF19AQ9NV58 838 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 MYO10Q9HD67 2058 aa15.03■□□□□ -0
TUBB3-207ENST00000554927 COL1A2P08123 1366 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 CDC45O75419 566 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 ITGB3BPQ13352 177 aaPredicted RBP15.02■□□□□ -0
TUBB3-207ENST00000554927 KRT32Q14532 448 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 CCDC149Q6ZUS6 474 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 OTOP3Q7RTS5 596 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 HEATR3Q7Z4Q2 680 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 ECHDC2Q86YB7 292 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 VPS52Q8N1B4 723 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 CCDC82Q8N4S0 544 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 SRBD1Q8N5C6 995 aaKnown RBP15.02■□□□□ -0
TUBB3-207ENST00000554927 FANCBQ8NB91 859 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 HELQQ8TDG4 1101 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 CCDC136Q96JN2 1154 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 SEMA4AQ9H3S1 761 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 AGO4Q9HCK5 861 aaKnown RBP15.02■□□□□ -0
TUBB3-207ENST00000554927 ZNF302Q9NR11 478 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 AKT3Q9Y243 479 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 R4GN57 208 aa15.02■□□□□ -0
TUBB3-207ENST00000554927 GPR32O75388 356 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 ATG7O95352 703 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 HMGB1P09429 215 aaKnown RBP15.01□□□□□ -0.01
TUBB3-207ENST00000554927 RXRAP19793 462 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 ZNF76P36508 570 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 BCAR1P56945 870 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 FGD1P98174 961 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 PUM1Q14671 1186 aaKnown RBP eCLIP15.01□□□□□ -0.01
TUBB3-207ENST00000554927 CLLU1OSQ5K130 101 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 SWSAP1Q6NVH7 229 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 MIS18BP1Q6P0N0 1132 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 CCDC60Q8IWA6 550 aaPredicted RBP15.01□□□□□ -0.01
TUBB3-207ENST00000554927 RIN2Q8WYP3 895 aaPredicted RBP15.01□□□□□ -0.01
TUBB3-207ENST00000554927 PGBD1Q96JS3 809 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 DUSP12Q9UNI6 340 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 DCHS1Q96JQ0 3298 aa15.01□□□□□ -0.01
TUBB3-207ENST00000554927 ZC3H11AO75152 810 aaKnown RBP eCLIP15□□□□□ -0.01
TUBB3-207ENST00000554927 C22orf31O95567 290 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 CCNE2O96020 404 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 CEP55Q53EZ4 464 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 ABHD15Q6UXT9 468 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 DHX32Q7L7V1 743 aaKnown RBP15□□□□□ -0.01
TUBB3-207ENST00000554927 SGMS1Q86VZ5 419 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 MICU3Q86XE3 530 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 SCLT1Q96NL6 688 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 MAP7D2Q96T17 732 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 MRPL9Q9BYD2 267 aaKnown RBP15□□□□□ -0.01
TUBB3-207ENST00000554927 LRRC2Q9BYS8 371 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 SFXN1Q9H9B4 322 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 KCNK12Q9HB15 430 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 RBM28Q9NW13 759 aaKnown RBP15□□□□□ -0.01
TUBB3-207ENST00000554927 NCOR2Q9Y618 2525 aa15□□□□□ -0.01
TUBB3-207ENST00000554927 IGKV6D-21A0A0A0MT36 114 aa14.99□□□□□ -0.01
TUBB3-207ENST00000554927 ZBTB42B2RXF5 422 aa14.99□□□□□ -0.01
TUBB3-207ENST00000554927 CFHP08603 1231 aa14.99□□□□□ -0.01
TUBB3-207ENST00000554927 CLCN3P51790 818 aa14.99□□□□□ -0.01
TUBB3-207ENST00000554927 NLRP11P59045 1033 aaKnown RBP14.99□□□□□ -0.01
TUBB3-207ENST00000554927 GIT2Q14161 759 aa14.99□□□□□ -0.01
TUBB3-207ENST00000554927 RAB11FIP4Q86YS3 637 aa14.99□□□□□ -0.01
TUBB3-207ENST00000554927 ZNF668Q96K58 619 aaPredicted RBP14.99□□□□□ -0.01
TUBB3-207ENST00000554927 ZBP1Q9H171 429 aa14.99□□□□□ -0.01
TUBB3-207ENST00000554927 TCEAL9Q9UHQ7 104 aa14.99□□□□□ -0.01
TUBB3-207ENST00000554927 NARSO43776 548 aaKnown RBP14.98□□□□□ -0.01
TUBB3-207ENST00000554927 KRT37O76014 449 aa14.98□□□□□ -0.01
TUBB3-207ENST00000554927 CTSAP10619 480 aa14.98□□□□□ -0.01
TUBB3-207ENST00000554927 TSGA10IPQ3SY00 556 aa14.98□□□□□ -0.01
TUBB3-207ENST00000554927 SPECC1Q5M775 1068 aa14.98□□□□□ -0.01
TUBB3-207ENST00000554927 ZC3H14Q6PJT7 736 aaKnown RBP14.98□□□□□ -0.01
TUBB3-207ENST00000554927 TMTC3Q6ZXV5 915 aa14.98□□□□□ -0.01
TUBB3-207ENST00000554927 GPR149Q86SP6 731 aa14.98□□□□□ -0.01
TUBB3-207ENST00000554927 PPFIBP1Q86W92 1011 aa14.98□□□□□ -0.01
TUBB3-207ENST00000554927 FEZF2Q8TBJ5 459 aa14.98□□□□□ -0.01
TUBB3-207ENST00000554927 SLC22A17Q8WUG5 538 aa14.98□□□□□ -0.01
TUBB3-207ENST00000554927 BBXQ8WY36 941 aaPredicted RBP14.98□□□□□ -0.01
TUBB3-207ENST00000554927 NAP1L2Q9ULW6 460 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms