RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 NOP58Q9Y2X3 529 aaKnown RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 hCG_2014768A0A024R1R8 64 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 H0Y858 1186 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 PLSCR1O15162 318 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 KPNA6O60684 536 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 ZNF623O75123 536 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 GLRX3O76003 335 aaKnown RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 CHGBP05060 677 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 MMEP08473 750 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 AOAHP28039 575 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 ANAPC15P60006 121 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 IGBP1P78318 339 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 AMPD3Q01432 767 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 CRY1Q16526 586 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 SPDYAQ5MJ70 313 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 RNF180Q86T96 592 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 TAX1BP1Q86VP1 789 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 KIF18BQ86Y91 864 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 NOSTRINQ8IVI9 506 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 ANKRD13AQ8IZ07 590 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 NEIL1Q96FI4 390 aaPredicted RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 LMF1Q96S06 567 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 CELF4Q9BZC1 486 aaKnown RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 KIAA1683Q9H0B3 1180 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 ATP23Q9Y6H3 246 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 SLC4A7Q9Y6M7 1214 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 ADAMTS12P58397 1594 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 CUX1P39880 1505 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ABCA5Q8WWZ7 1642 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 M0R2C6 588 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 CBX4O00257 560 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 PPM1GO15355 546 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 AMHP03971 560 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 PTGS1P23219 599 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 POLD1P28340 1107 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 SCNN1BP51168 640 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 TGFB2P61812 414 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 LACTBP83111 547 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 USP10Q14694 798 aaKnown RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 SEPT7Q16181 437 aaKnown RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 TMEM177Q53S58 311 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 FIGNQ5HY92 759 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 IGFL4Q6B9Z1 124 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 OVCH1Q7RTY7 1134 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 FUKQ8N0W3 1084 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 NLGN4XQ8N0W4 816 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 DPYSL5Q9BPU6 564 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ORAI3Q9BRQ5 295 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 DEF6Q9H4E7 631 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 CABP5Q9NP86 173 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 INCENPQ9NQS7 918 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ARHGAP28Q9P2N2 729 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 SHROOM2Q13796 1616 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ABCC8Q09428 1581 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 MAPKBP1O60336 1514 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 RUSC2Q8N2Y8 1516 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 PRAMEF25A6NGN4 478 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 TRAF5O00463 557 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 SCDO00767 359 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 CLASP2O75122 1294 aaKnown RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 CPEP16870 476 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 POU3F3P20264 500 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 MECP2P51608 486 aaKnown RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 KCNQ1P51787 676 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 CD83Q01151 205 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 STRN3Q13033 797 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 DUSP8Q13202 625 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 SART3Q15020 963 aaKnown RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ACAP1Q15027 740 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 DHCR24Q15392 516 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ARHGAP44Q17R89 818 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 KANK2Q63ZY3 851 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 Q6ZSN1 163 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 STRA8Q7Z7C7 330 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 BCL6BQ8N143 479 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 AFAP1L2Q8N4X5 818 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 C2orf69Q8N8R5 385 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 CHST14Q8NCH0 376 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 OR2W6PQ8NHA6 318 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ASB15Q8WXK1 588 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 CFHR4Q92496 578 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ZNF747Q9BV97 191 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 CARD11Q9BXL7 1154 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ZDHHC5Q9C0B5 715 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 GALNT8Q9NY28 637 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 B4GALT6Q9UBX8 382 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 MCM8Q9UJA3 840 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ZFR2Q9UPR6 939 aaKnown RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ZKSCAN5Q9Y2L8 839 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 ATP8A1Q9Y2Q0 1164 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 NUB1Q9Y5A7 615 aa2.11□□□□□ -2.07
PRPF39-208ENST00000554785 RIMS1Q86UR5 1692 aaKnown RBP2.11□□□□□ -2.07
PRPF39-208ENST00000554785 MADDQ8WXG6 1647 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 ARID4BQ4LE39 1312 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-208ENST00000554785 PTPDC1A2A3K4 754 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 GAS7O60861 476 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 F2P00734 622 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 SLPIP03973 132 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms