RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 SYNGAP1Q96PV0 1343 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 LCTP09848 1927 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 A0A1B0GUL7 405 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 BCAR3O75815 825 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 KRT38O76015 456 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 BAG3O95817 575 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 FDX1P10109 184 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 GNAT2P19087 354 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 CST5P28325 142 aaPredicted RBP3.03□□□□□ -1.93
PRPF39-206ENST00000554429 ADORA1P30542 326 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 HSPA4P34932 840 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 CCNA1P78396 465 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 PDE1CQ14123 709 aaPredicted RBP3.03□□□□□ -1.93
PRPF39-206ENST00000554429 PDE3AQ14432 1141 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 WTAPQ15007 396 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 AKNAD1Q5T1N1 836 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 MFSD14CQ5VZR4 134 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 DZIP1Q86YF9 867 aaKnown RBP3.03□□□□□ -1.93
PRPF39-206ENST00000554429 TEX11Q8IYF3 940 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 C7orf61Q8IZ16 206 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 CARNMT1Q8N4J0 409 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 TAB3Q8N5C8 712 aaPredicted RBP3.03□□□□□ -1.93
PRPF39-206ENST00000554429 DEFB123Q8N688 67 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 NAT8LQ8N9F0 302 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 CLP1Q92989 425 aaKnown RBP3.03□□□□□ -1.93
PRPF39-206ENST00000554429 DHRS1Q96LJ7 313 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 MAP7D2Q96T17 732 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 P2RX7Q99572 595 aaKnown RBP3.03□□□□□ -1.93
PRPF39-206ENST00000554429 ASPSCR1Q9BZE9 553 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 IQCGQ9H095 443 aaKnown RBP3.03□□□□□ -1.93
PRPF39-206ENST00000554429 TSPY26PQ9H489 355 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 RABEP2Q9H5N1 569 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 CDHR5Q9HBB8 845 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 PRDM6Q9NQX0 595 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 BLOC1S4Q9NUP1 217 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 PIH1D1Q9NWS0 290 aaKnown RBP3.03□□□□□ -1.93
PRPF39-206ENST00000554429 FNIP2Q9P278 1114 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 CDV3Q9UKY7 258 aaKnown RBP3.03□□□□□ -1.93
PRPF39-206ENST00000554429 ZBTB21Q9ULJ3 1066 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 TNNQ9UQP3 1299 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 PCDHB15Q9Y5E8 787 aa3.03□□□□□ -1.93
PRPF39-206ENST00000554429 FLT1P17948 1338 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ATP6V1E1P36543 226 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 MCM2P49736 904 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 GUCY2FP51841 1108 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 GTF2A1P52655 376 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 MRPS35P82673 323 aaKnown RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 APBA1Q02410 837 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TCP10Q12799 353 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 SPP2Q13103 211 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ZSCAN26Q16670 478 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 C11orf91Q3C1V1 193 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ATP13A4Q4VNC1 1196 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 SHQ1Q6PI26 577 aaKnown RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 LYPD4Q6UWN0 246 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ATF7IPQ6VMQ6 1270 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ANKRD33Q7Z3H0 272 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 GALNT5Q7Z7M9 940 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TMEM110Q86TL2 294 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 MYLK4Q86YV6 388 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TMEM151BQ8IW70 566 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.02□□□□□ -1.937e-10■■■□□ 15.3
PRPF39-206ENST00000554429 FAM184AQ8NB25 1140 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 KLHDC4Q8TBB5 520 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 SSH3Q8TE77 659 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 RSAD2Q8WXG1 361 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 NACC2Q96BF6 587 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 UIMC1Q96RL1 719 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 UBE2OQ9C0C9 1292 aaKnown RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ZNF700Q9H0M5 742 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 UPF3AQ9H1J1 476 aaKnown RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 MROH8Q9H579 483 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TMEM165Q9HC07 324 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 SRA1Q9HD15 236 aaKnown RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TXNRD2Q9NNW7 524 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ALG13Q9NP73 1137 aaKnown RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 PLCB1Q9NQ66 1216 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 RRAGDQ9NQL2 400 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.02□□□□□ -1.933e-10■■■■□ 19.3
PRPF39-206ENST00000554429 PA2G4Q9UQ80 394 aaKnown RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 CNPY2Q9Y2B0 182 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 MYH4Q9Y623 1939 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 SCO2A0A1W2PP80 73 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TRIM75PA6NK02 468 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 FAM25EA8MYX2 175 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ATP2A1O14983 1001 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 MBD4O95243 580 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 RASGRP1O95267 797 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 SSBP05455 408 aaKnown RBP eCLIP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 PYGLP06737 847 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 MZF1P28698 734 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 GUCY1A2P33402 732 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 MCAMP43121 646 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 HMGCS2P54868 508 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 NLRP12P59046 1061 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 NFKB2Q00653 900 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 APOBRQ0VD83 1088 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 PTGDRQ13258 359 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 PICALMQ13492 652 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms