RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 CLCN4P51793 760 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 BCAR1P56945 870 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 FAM189BP81408 668 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 MTAPQ13126 283 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 SEMA3FQ13275 785 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 STPG1Q5TH74 334 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 C19orf48Q6RUI8 117 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
GPN3-208ENST00000550974 FCHSD1Q86WN1 690 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 KBTBD3Q8NAB2 608 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 CLDN23Q96B33 292 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 KLHL5Q96PQ7 755 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 SEC62Q99442 399 aaKnown RBP13.05□□□□□ -0.32
GPN3-208ENST00000550974 LSM14BQ9BX40 385 aaKnown RBP13.05□□□□□ -0.32
GPN3-208ENST00000550974 IGSF5Q9NSI5 407 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 C2orf16Q68DN1 1984 aa13.05□□□□□ -0.32
GPN3-208ENST00000550974 GPR182O15218 404 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 FIBPO43427 364 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 TARSP26639 723 aaKnown RBP13.04□□□□□ -0.32
GPN3-208ENST00000550974 CCDC6Q16204 474 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 ODR4Q5SWX8 454 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 PDZD3Q86UT5 571 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
GPN3-208ENST00000550974 LURAP1LQ8IV03 231 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 ITPRIPQ8IWB1 547 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 RNF169Q8NCN4 708 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 TMEM40Q8WWA1 233 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 EMILIN2Q9BXX0 1053 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 CDHR5Q9HBB8 845 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 MAN1C1Q9NR34 630 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
GPN3-208ENST00000550974 DACH1Q9UI36 760 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 WASF3Q9UPY6 502 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 PCDHA2Q9Y5H9 948 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 KDM3AQ9Y4C1 1321 aa13.04□□□□□ -0.32
GPN3-208ENST00000550974 KAT6AQ92794 2004 aa13.03□□□□□ -0.32
GPN3-208ENST00000550974 INPPL1O15357 1258 aa13.03□□□□□ -0.32
GPN3-208ENST00000550974 ZFYP08048 801 aaPredicted RBP13.03□□□□□ -0.32
GPN3-208ENST00000550974 TDGF1P13385 188 aa13.03□□□□□ -0.32
GPN3-208ENST00000550974 NOVA1P51513 510 aaKnown RBP13.03□□□□□ -0.32
GPN3-208ENST00000550974 POLGP54098 1239 aaPredicted RBP13.03□□□□□ -0.32
GPN3-208ENST00000550974 MRPS9P82933 396 aaKnown RBP13.03□□□□□ -0.32
GPN3-208ENST00000550974 SRSF5Q13243 272 aaKnown RBP13.03□□□□□ -0.32
GPN3-208ENST00000550974 PPP2R5DQ14738 602 aa13.03□□□□□ -0.32
GPN3-208ENST00000550974 RSPO2Q6UXX9 243 aaPredicted RBP13.03□□□□□ -0.32
GPN3-208ENST00000550974 CMASQ8NFW8 434 aaPredicted RBP13.03□□□□□ -0.32
GPN3-208ENST00000550974 TRAPPC12Q8WVT3 735 aa13.03□□□□□ -0.32
GPN3-208ENST00000550974 SMG7Q92540 1137 aaKnown RBP13.03□□□□□ -0.32
GPN3-208ENST00000550974 NELL2Q99435 816 aa13.03□□□□□ -0.32
GPN3-208ENST00000550974 SCNM1Q9BWG6 230 aa13.03□□□□□ -0.32
GPN3-208ENST00000550974 PIDD1Q9HB75 910 aa13.03□□□□□ -0.32
GPN3-208ENST00000550974 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.03□□□□□ -0.32
GPN3-208ENST00000550974 GIPC1O14908 333 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 HRO43593 1189 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 ORC4O43929 436 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 SSBP05455 408 aaKnown RBP eCLIP13.02□□□□□ -0.33
GPN3-208ENST00000550974 CNPP09543 421 aaKnown RBP13.02□□□□□ -0.33
GPN3-208ENST00000550974 RPS9P46781 194 aaKnown RBP13.02□□□□□ -0.33
GPN3-208ENST00000550974 GHRHRQ02643 423 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 ZNF252P-AS1Q0IIN9 211 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 PLCB4Q15147 1175 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 PARM1Q6UWI2 310 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 FAM43BQ6ZT52 329 aaPredicted RBP13.02□□□□□ -0.33
GPN3-208ENST00000550974 TPRG1Q6ZUI0 275 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 DDX53Q86TM3 631 aaKnown RBP13.02□□□□□ -0.33
GPN3-208ENST00000550974 NME8Q8N427 588 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 ADAM32Q8TC27 787 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 SEPT1Q8WYJ6 367 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 FGF14Q92915 247 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 INPP4AQ96PE3 977 aaPredicted RBP13.02□□□□□ -0.33
GPN3-208ENST00000550974 SMARCAD1Q9H4L7 1026 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 TCP11L1Q9NUJ3 509 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 MAP3K20Q9NYL2 800 aaKnown RBP13.02□□□□□ -0.33
GPN3-208ENST00000550974 LAMA4Q16363 1823 aa13.02□□□□□ -0.33
GPN3-208ENST00000550974 GSTTP1A0A1W2PQM5 241 aa13.01□□□□□ -0.33
GPN3-208ENST00000550974 ZC3H11AO75152 810 aaKnown RBP eCLIP13.01□□□□□ -0.33
GPN3-208ENST00000550974 RFPL2O75678 378 aa13.01□□□□□ -0.33
GPN3-208ENST00000550974 CLLU1OSQ5K130 101 aa13.01□□□□□ -0.33
GPN3-208ENST00000550974 ZKSCAN2Q63HK3 967 aa13.01□□□□□ -0.33
GPN3-208ENST00000550974 CYP26C1Q6V0L0 522 aa13.01□□□□□ -0.33
GPN3-208ENST00000550974 FAM160A2Q8N612 972 aaPredicted RBP13.01□□□□□ -0.33
GPN3-208ENST00000550974 HELQQ8TDG4 1101 aa13.01□□□□□ -0.33
GPN3-208ENST00000550974 PPP1R16BQ96T49 567 aa13.01□□□□□ -0.33
GPN3-208ENST00000550974 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
GPN3-208ENST00000550974 DOCK5Q9H7D0 1870 aa13.01□□□□□ -0.33
GPN3-208ENST00000550974 SMIM35A0A1B0GVV1 85 aa13□□□□□ -0.33
GPN3-208ENST00000550974 AXIN1O15169 862 aa13□□□□□ -0.33
GPN3-208ENST00000550974 STAM2O75886 525 aa13□□□□□ -0.33
GPN3-208ENST00000550974 PFKPQ01813 784 aa13□□□□□ -0.33
GPN3-208ENST00000550974 FZD5Q13467 585 aa13□□□□□ -0.33
GPN3-208ENST00000550974 DSC3Q14574 896 aa13□□□□□ -0.33
GPN3-208ENST00000550974 FAM228AQ86W67 206 aa13□□□□□ -0.33
GPN3-208ENST00000550974 BCL7CQ8WUZ0 217 aaPredicted RBP13□□□□□ -0.33
GPN3-208ENST00000550974 PHKBQ93100 1093 aa13□□□□□ -0.33
GPN3-208ENST00000550974 IGSF21Q96ID5 467 aa13□□□□□ -0.33
GPN3-208ENST00000550974 TTC14Q96N46 770 aa13□□□□□ -0.33
GPN3-208ENST00000550974 BBC3Q96PG8 261 aaPredicted RBP13□□□□□ -0.33
GPN3-208ENST00000550974 SENP7Q9BQF6 1050 aa13□□□□□ -0.33
GPN3-208ENST00000550974 ARRDC1-AS1Q9H2J1 176 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms