RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 EYA4O95677 639 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 GPC3P51654 580 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 TFDP1Q14186 410 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 HYIQ5T013 277 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 PADI6Q6TGC4 694 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 LINC00301Q8NCQ3 95 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 PHOSPHO2Q8TCD6 241 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 KCNG4Q8TDN1 519 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 PRPF31Q8WWY3 499 aaKnown RBP16.63■□□□□ 0.25
GPN3-206ENST00000549963 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 PPP1R16BQ96T49 567 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 CSRNP2Q9H175 543 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 BHMT2Q9H2M3 363 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
GPN3-206ENST00000549963 COL4A3BPQ9Y5P4 624 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 USO1O60763 962 aaKnown RBP16.62■□□□□ 0.25
GPN3-206ENST00000549963 AMHP03971 560 aa16.62■□□□□ 0.25
GPN3-206ENST00000549963 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
GPN3-206ENST00000549963 EIF4BP23588 611 aaKnown RBP16.62■□□□□ 0.25
GPN3-206ENST00000549963 KRT85P78386 507 aa16.62■□□□□ 0.25
GPN3-206ENST00000549963 NFX1Q12986 1120 aaKnown RBP16.62■□□□□ 0.25
GPN3-206ENST00000549963 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
GPN3-206ENST00000549963 ECM1Q16610 540 aa16.62■□□□□ 0.25
GPN3-206ENST00000549963 RASIP1Q5U651 963 aa16.62■□□□□ 0.25
GPN3-206ENST00000549963 SLC9A7Q96T83 725 aa16.62■□□□□ 0.25
GPN3-206ENST00000549963 OSMRQ99650 979 aa16.62■□□□□ 0.25
GPN3-206ENST00000549963 MMTAG2Q9BU76 263 aaKnown RBP16.62■□□□□ 0.25
GPN3-206ENST00000549963 CCSER1Q9C0I3 900 aa16.62■□□□□ 0.25
GPN3-206ENST00000549963 ADAMTS10Q9H324 1103 aa16.62■□□□□ 0.25
GPN3-206ENST00000549963 BMP2KQ9NSY1 1161 aaPredicted RBP16.62■□□□□ 0.25
GPN3-206ENST00000549963 FBXO2Q9UK22 296 aaPredicted RBP16.62■□□□□ 0.25
GPN3-206ENST00000549963 PADI3Q9ULW8 664 aa16.62■□□□□ 0.25
GPN3-206ENST00000549963 SRGAP2CP0DJJ0 459 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 ATP2A2P16615 1042 aaKnown RBP16.61■□□□□ 0.25
GPN3-206ENST00000549963 CYP11B2P19099 503 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 CD52P31358 61 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 DNM1Q05193 864 aaKnown RBP16.61■□□□□ 0.25
GPN3-206ENST00000549963 LAMTOR4Q0VGL1 99 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 DRP2Q13474 957 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 FAM102BQ5T8I3 360 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 VWCEQ96DN2 955 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 NLRP4Q96MN2 994 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 PLIN2Q99541 437 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 ZBED2Q9BTP6 218 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 CDHR5Q9HBB8 845 aa16.61■□□□□ 0.25
GPN3-206ENST00000549963 A0A087WZ62 844 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 E9PMD0 336 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 CUTAO60888 179 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 SSBP05455 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
GPN3-206ENST00000549963 DARSP14868 501 aaKnown RBP16.6■□□□□ 0.25
GPN3-206ENST00000549963 ZSCAN20P17040 1043 aaPredicted RBP16.6■□□□□ 0.25
GPN3-206ENST00000549963 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
GPN3-206ENST00000549963 PHKA2P46019 1235 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 ME1P48163 572 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 SMAD3P84022 425 aaKnown RBP16.6■□□□□ 0.25
GPN3-206ENST00000549963 NCBP1Q09161 790 aaKnown RBP16.6■□□□□ 0.25
GPN3-206ENST00000549963 MAEAQ7L5Y9 396 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 SRGAP1Q7Z6B7 1085 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 IFT74Q96LB3 600 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 FDXACB1Q9BRP7 624 aaPredicted RBP16.6■□□□□ 0.25
GPN3-206ENST00000549963 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 AGO3Q9H9G7 860 aaKnown RBP16.6■□□□□ 0.25
GPN3-206ENST00000549963 CXXC1Q9P0U4 656 aaPredicted RBP16.6■□□□□ 0.25
GPN3-206ENST00000549963 KCNG1Q9UIX4 513 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 MSRAQ9UJ68 235 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 ST3GAL5Q9UNP4 418 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 ZDHHC9Q9Y397 364 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 NOC2LQ9Y3T9 749 aaKnown RBP16.6■□□□□ 0.25
GPN3-206ENST00000549963 TRIOBPQ9H2D6 2365 aa16.6■□□□□ 0.25
GPN3-206ENST00000549963 SIP14410 1827 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 DENND3A2RUS2 1198 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 ARL2P36404 184 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 WDR5P61964 334 aaKnown RBP16.59■□□□□ 0.25
GPN3-206ENST00000549963 GRIN1Q05586 938 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 POU5F1BQ06416 359 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 GRB10Q13322 594 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 PPP2R5AQ15172 486 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 RAB30Q15771 203 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 SPECC1Q5M775 1068 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 RRAGBQ5VZM2 374 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 SYT2Q8N9I0 419 aaPredicted RBP16.59■□□□□ 0.25
GPN3-206ENST00000549963 RNF149Q8NC42 400 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 SYMPKQ92797 1274 aaKnown RBP16.59■□□□□ 0.25
GPN3-206ENST00000549963 KIFAP3Q92845 792 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 EPSTI1Q96J88 318 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 ZNF668Q96K58 619 aaPredicted RBP16.59■□□□□ 0.25
GPN3-206ENST00000549963 CLIC6Q96NY7 704 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 PNMA5Q96PV4 448 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 SCAND2PQ9GZW5 306 aaPredicted RBP16.59■□□□□ 0.25
GPN3-206ENST00000549963 POLR3FQ9H1D9 316 aaPredicted RBP16.59■□□□□ 0.25
GPN3-206ENST00000549963 KCND2Q9NZV8 630 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 RCOR1Q9UKL0 485 aa16.59■□□□□ 0.25
GPN3-206ENST00000549963 MICAL3Q7RTP6 2002 aa16.58■□□□□ 0.25
GPN3-206ENST00000549963 ENPP3O14638 875 aa16.58■□□□□ 0.24
GPN3-206ENST00000549963 PLA2G4BP0C869 781 aa16.58■□□□□ 0.24
GPN3-206ENST00000549963 KARSQ15046 597 aaKnown RBP16.58■□□□□ 0.24
GPN3-206ENST00000549963 PCBP1Q15365 356 aaKnown RBP eCLIP16.58■□□□□ 0.24
GPN3-206ENST00000549963 TMEM119Q4V9L6 283 aa16.58■□□□□ 0.24
GPN3-206ENST00000549963 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
GPN3-206ENST00000549963 KSR1Q8IVT5 923 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms