RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 SCRN1Q12765 414 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 SLC4A8Q2Y0W8 1093 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 RTKN2Q8IZC4 609 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 MAFAQ8NHW3 353 aaPredicted RBP5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 ALG3Q92685 438 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 TSPAN17Q96FV3 270 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 NOX5Q96PH1 765 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 PSMD1Q99460 953 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 GDF15Q99988 308 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 SYT3Q9BQG1 590 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 HTATIP2Q9BUP3 242 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 RTEL1Q9NZ71 1219 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 CDHR2Q9BYE9 1310 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 NCAPD2Q15021 1401 aa5.39□□□□□ -1.55
TRAFD1-204ENST00000548092 KDM3BQ7LBC6 1761 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 SMAD7O15105 426 aaKnown RBP5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 TBX1O43435 398 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 NTRK1P04629 796 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 THBDP07204 575 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 ANP32AP39687 249 aaKnown RBP5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 GMPSP49915 693 aaPredicted RBP5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 MRE11P49959 708 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 GTF2IRD2BQ6EKJ0 949 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 FAM109BQ6ICB4 259 aaPredicted RBP5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 GTF2IRD2Q86UP8 949 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 USP33Q8TEY7 942 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 MMP19Q99542 508 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 LUC7LQ9NQ29 371 aaKnown RBP5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 STRIP2Q9ULQ0 834 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 PMF1-BGLAPU3KQ54 211 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 A0A1W2PP64 1363 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 TONSLQ96HA7 1378 aa5.38□□□□□ -1.55
TRAFD1-204ENST00000548092 SCN7AQ01118 1682 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 FLNBO75369 2602 aaKnown RBP5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 ADM5C9JUS6 153 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 ETFBP38117 255 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 AMPHP49418 695 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 SF1Q15637 639 aaKnown RBP5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 SKOR2Q2VWA4 1001 aaPredicted RBP5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 SLC9C1Q4G0N8 1177 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 C6orf15Q6UXA7 325 aaPredicted RBP5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 KRT26Q7Z3Y9 468 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 B3GNT8Q7Z7M8 397 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 TRIM59Q8IWR1 403 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 NETO2Q8NC67 525 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 CXorf38Q8TB03 319 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 MICAL1Q8TDZ2 1067 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 FRS2Q8WU20 508 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 PPP1R14AQ96A00 147 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 SIN3AQ96ST3 1273 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 C1QTNF1Q9BXJ1 281 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 RNF38Q9H0F5 515 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 CCSER2Q9H7U1 834 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 CYP26B1Q9NR63 512 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 SPATA6Q9NWH7 488 aaPredicted RBP5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 TMEFF2Q9UIK5 374 aaPredicted RBP5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 FAN1Q9Y2M0 1017 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 NPC1L1Q9UHC9 1359 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 NCOR2Q9Y618 2525 aa5.37□□□□□ -1.55
TRAFD1-204ENST00000548092 ACACBO00763 2458 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 B2RBV5 119 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 PPM1GO15355 546 aaPredicted RBP5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 PRICKLE3O43900 615 aaPredicted RBP5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 NPHS1O60500 1241 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 PHKG2P15735 406 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 KCNC1P48547 511 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 WWC2Q6AWC2 1192 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 CABP7Q86V35 215 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 CCDC103Q8IW40 242 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 SP8Q8IXZ3 490 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 TDHQ8IZJ6 230 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 CNBD1Q8NA66 436 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 SMARCC2Q8TAQ2 1214 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 NPLOC4Q8TAT6 608 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 CD99L2Q8TCZ2 262 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 PEX11GQ96HA9 241 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 ERO1AQ96HE7 468 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 MPHOSPH9Q99550 1183 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 SPATA25Q9BR10 227 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 NKX2-4Q9H2Z4 354 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 MARCH2Q9P0N8 246 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 EVC2Q86UK5 1308 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 EDC4Q6P2E9 1401 aaKnown RBP5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 COL2A1P02458 1487 aaPredicted RBP5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 SSC5DA1L4H1 1573 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 DMDP11532 3685 aa5.36□□□□□ -1.55
TRAFD1-204ENST00000548092 MYO15AQ9UKN7 3530 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 GPR179Q6PRD1 2367 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 TRBV23OR9-2A0A075B6M9 112 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 SHTN1A0MZ66 631 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 SH3D21A4FU49 640 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 NOP56O00567 594 aaKnown RBP5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 SGSM2O43147 1006 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 ITGAVP06756 1048 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 NPR1P16066 1061 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 SYN1P17600 705 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 ZNF143P52747 638 aaPredicted RBP5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 KRTAP10-2P60368 255 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 IRX6P78412 446 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms