RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MOGSQ13724 837 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 NOL9Q5SY16 702 aaKnown RBP13.11□□□□□ -0.31
CCDC38-202ENST00000546386 CBWD2Q8IUF1 395 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 TMTC1Q8IUR5 882 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 ZBTB45Q96K62 511 aaPredicted RBP13.11□□□□□ -0.31
CCDC38-202ENST00000546386 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
CCDC38-202ENST00000546386 ZNHIT6Q9NWK9 470 aaKnown RBP13.11□□□□□ -0.31
CCDC38-202ENST00000546386 SMARCAL1Q9NZC9 954 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 GCNT4Q9P109 453 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 SALL4Q9UJQ4 1053 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 PPP2R3BQ9Y5P8 575 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 DENND3A2RUS2 1198 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 DLATP10515 647 aaKnown RBP13.1□□□□□ -0.31
CCDC38-202ENST00000546386 NPTX2P47972 431 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 ZBED6P86452 979 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 C1QBPQ07021 282 aaKnown RBP13.1□□□□□ -0.31
CCDC38-202ENST00000546386 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 BAP1Q92560 729 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 GLG1Q92896 1179 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 SLC35C1Q96A29 364 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 ERGIC2Q96RQ1 377 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 PDHXO00330 501 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 ZNF185O15231 689 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 CALUO43852 315 aaPredicted RBP13.1□□□□□ -0.31
CCDC38-202ENST00000546386 SSTR3P32745 418 aaPredicted RBP13.1□□□□□ -0.31
CCDC38-202ENST00000546386 USP8P40818 1118 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 CDR1P51861 262 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 RNASE9P60153 205 aaKnown RBP13.1□□□□□ -0.31
CCDC38-202ENST00000546386 USP50Q70EL3 339 aaPredicted RBP13.1□□□□□ -0.31
CCDC38-202ENST00000546386 ZNF397Q8NF99 534 aaPredicted RBP13.1□□□□□ -0.31
CCDC38-202ENST00000546386 KAT5Q92993 513 aa13.1□□□□□ -0.31
CCDC38-202ENST00000546386 LARSQ9P2J5 1176 aaKnown RBP13.1□□□□□ -0.31
CCDC38-202ENST00000546386 PDXKO00764 312 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 FGFR1OPO95684 399 aaKnown RBP13.09□□□□□ -0.31
CCDC38-202ENST00000546386 EPB41P11171 864 aaKnown RBP13.09□□□□□ -0.31
CCDC38-202ENST00000546386 PON1P27169 355 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 ADSSP30520 456 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 TCF7P36402 384 aaPredicted RBP13.09□□□□□ -0.31
CCDC38-202ENST00000546386 EXOC3L4Q17RC7 722 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 PRAMEF19Q5SWL8 479 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 HS2ST1Q7LGA3 356 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 ARMC9Q7Z3E5 817 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 PLEKHO2Q8TD55 490 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 LENG1Q96BZ8 264 aaPredicted RBP13.09□□□□□ -0.31
CCDC38-202ENST00000546386 BICD1Q96G01 975 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 OLFML3Q9NRN5 406 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 PACSIN2Q9UNF0 486 aaPredicted RBP13.09□□□□□ -0.31
CCDC38-202ENST00000546386 TRAF3IP3Q9Y228 551 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 CCL15-CCL14A0A0B4J2E2 113 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 LRRIQ4A6NIV6 560 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 BTBD19C9JJ37 291 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 SRGAP2CP0DJJ0 459 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 KIF11P52732 1056 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 KRT76Q01546 638 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 CCL15Q16663 113 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 GNPTABQ3T906 1256 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 PAXIP1Q6ZW49 1069 aaPredicted RBP13.09□□□□□ -0.31
CCDC38-202ENST00000546386 SPAG5Q96R06 1193 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 PI4K2AQ9BTU6 479 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 XPNPEP1Q9NQW7 623 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 SEPT11Q9NVA2 429 aaKnown RBP13.09□□□□□ -0.31
CCDC38-202ENST00000546386 EHD2Q9NZN4 543 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 AGTPBP1Q9UPW5 1226 aa13.09□□□□□ -0.31
CCDC38-202ENST00000546386 RANBP2P49792 3224 aaKnown RBP13.08□□□□□ -0.31
CCDC38-202ENST00000546386 SPATA31C2B4DYI2 1134 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 NCK2O43639 380 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 KIF5CO60282 957 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 GFPT2O94808 682 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 MOCS3O95396 460 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 AFPP02771 609 aaKnown RBP13.08□□□□□ -0.32
CCDC38-202ENST00000546386 PLS3P13797 630 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 ACOT2P49753 483 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 POLGP54098 1239 aaPredicted RBP13.08□□□□□ -0.32
CCDC38-202ENST00000546386 OSTNP61366 133 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 PPP2R3AQ06190 1150 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 KCTD2Q14681 263 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 ABHD15Q6UXT9 468 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 MMP19Q99542 508 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 KMT5AQ9NQR1 393 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 ANKFY1Q9P2R3 1169 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 EIF3JO75822 258 aaKnown RBP13.08□□□□□ -0.32
CCDC38-202ENST00000546386 UCHL3P15374 230 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCDC38-202ENST00000546386 WNT7BP56706 349 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 MAP2K1Q02750 393 aaPredicted RBP13.08□□□□□ -0.32
CCDC38-202ENST00000546386 PPP3CAQ08209 521 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 COBLL1Q53SF7 1204 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 FGD4Q96M96 766 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 PCYT2Q99447 389 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 PTPN18Q99952 460 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 ZNF302Q9NR11 478 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 RNF19AQ9NV58 838 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 GINS2Q9Y248 185 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 FRMD4BQ9Y2L6 1034 aa13.08□□□□□ -0.32
CCDC38-202ENST00000546386 MYH10P35580 1976 aa13.07□□□□□ -0.32
CCDC38-202ENST00000546386 A0A087X0T9 212 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms