RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-225	ENST00000545930	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	TNMD	Q9H2S6	317 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	BCAS3	Q9H6U6	928 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	SERTAD1	Q9UHV2	236 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	KCNG1	Q9UIX4	513 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	IGSF9B	Q9UPX0	1349 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	ARHGEF35	A5YM69	484 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	MOXD2P	A6NHM9	499 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930		H3BRB1	525 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	SMC2	O95347	1197 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	PRKCE	Q02156	737 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	LONRF3	Q496Y0	759 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	XKR9	Q5GH70	373 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	ZNF484	Q5JVG2	852 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	GJC2	Q5T442	439 aa	Predicted RBP	10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	CCDC183	Q5T5S1	534 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	GPT2	Q8TD30	523 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	PLIN2	Q99541	437 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	MTG1	Q9BT17	334 aa	Predicted RBP	10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	NIFK	Q9BYG3	293 aa	Known RBP	10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	RNF208	Q9H0X6	261 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	NUP62CL	Q9H1M0	184 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	TUT1	Q9H6E5	874 aa	Known RBP	10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	SYNRG	Q9UMZ2	1314 aa		10.8	□□□□□ -0.68
DDB1-225	ENST00000545930	TTC24	A2A3L6	582 aa	Predicted RBP	10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	RRN3P2	A6NIE6	340 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	KBTBD13	C9JR72	458 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930		E9PMD0	336 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	GAS2	O43903	313 aa	Known RBP	10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	DXO	O77932	396 aa	Known RBP	10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	SSB	P05455	408 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	MYL3	P08590	195 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	PLA2G4B	P0C869	781 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	GNAT1	P11488	350 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	CCL5	P13501	91 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	ECM1	Q16610	540 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	NAALADL2	Q58DX5	795 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	TMEM63B	Q5T3F8	832 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	KLHDC9	Q8NEP7	349 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	PIGO	Q8TEQ8	1089 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	ATP8B4	Q8TF62	1192 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	ARMC5	Q96C12	935 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	CEP170P1	Q96L14	293 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	PCYT2	Q99447	389 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	C16orf70	Q9BSU1	422 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	BHMT2	Q9H2M3	363 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	CLSTN2	Q9H4D0	955 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	PAK6	Q9NQU5	681 aa	Predicted RBP	10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	KBTBD4	Q9NVX7	518 aa		10.79	□□□□□ -0.68
DDB1-225	ENST00000545930	COL1A2	P08123	1366 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930		A0A087X0B3	334 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	MAGEB2	O15479	319 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	ADCY6	O43306	1168 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	ZNF862	O60290	1169 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	ADAMTS4	O75173	837 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	PGK1	P00558	417 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	KRT18	P05783	430 aa	Known RBP	10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	RFC5	P40937	340 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	RARRES1	P49788	294 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	DNM2	P50570	870 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	SLC12A3	P55017	1021 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	PURA	Q00577	322 aa	Known RBP	10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	DHX8	Q14562	1220 aa	Known RBP	10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	MCM6	Q14566	821 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	POSTN	Q15063	836 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	PLCB4	Q15147	1175 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	LRRC41	Q15345	812 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	CNNM4	Q6P4Q7	775 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	SH3RF1	Q7Z6J0	888 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	RETREG2	Q8NC44	543 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	MCPH1	Q8NEM0	835 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	SNIP1	Q8TAD8	396 aa	Known RBP	10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	PAGE5	Q96GU1	130 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	ZNF333	Q96JL9	665 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	C7orf25	Q9BPX7	421 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	UNC93B1	Q9H1C4	597 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	CYP26B1	Q9NR63	512 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	BLOC1S4	Q9NUP1	217 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	NRCAM	Q92823	1304 aa		10.78	□□□□□ -0.68
DDB1-225	ENST00000545930	PVALEF	A0A1B0GWK0	134 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	F2	P00734	622 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	RPLP2	P05387	115 aa	Known RBP	10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	ASGR1	P07306	291 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	GJB1	P08034	283 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	ATP4A	P20648	1035 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	TMOD1	P28289	359 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	CLCN1	P35523	988 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	AFM	P43652	599 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	PSMC6	P62333	389 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	CDC42EP1	Q00587	391 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	BEX3	Q00994	111 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	KCNA10	Q16322	511 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	UGCG	Q16739	394 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	KIAA0753	Q2KHM9	967 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	RINT1	Q6NUQ1	792 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	CAVIN1	Q6NZI2	390 aa	Known RBP	10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	ANO5	Q75V66	913 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	GPBP1	Q86WP2	473 aa		10.77	□□□□□ -0.69
DDB1-225	ENST00000545930	CCDC65	Q8IXS2	484 aa		10.77	□□□□□ -0.69

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