RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 PCDHA12Q9UN75 941 aa18.61■□□□□ 0.57
PTPN6-221ENST00000543120 PCDHB7Q9Y5E2 793 aa18.61■□□□□ 0.57
PTPN6-221ENST00000543120 A0A087WWV3 80 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 NEMFO60524 1076 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 CTNNB1P35222 781 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 ODR4Q5SWX8 454 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 TPH2Q8IWU9 490 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 C4orf19Q8IY42 314 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 CMTR2Q8IYT2 770 aaKnown RBP18.6■□□□□ 0.57
PTPN6-221ENST00000543120 NLRP7Q8WX94 980 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 MRPL38Q96DV4 380 aaKnown RBP18.6■□□□□ 0.57
PTPN6-221ENST00000543120 CEP170P1Q96L14 293 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 EIF2AK1Q9BQI3 630 aaKnown RBP18.6■□□□□ 0.57
PTPN6-221ENST00000543120 C1orf112Q9NSG2 853 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 LRFN2Q9ULH4 789 aa18.6■□□□□ 0.57
PTPN6-221ENST00000543120 TTC3P53804 2025 aa18.59■□□□□ 0.57
PTPN6-221ENST00000543120 A0A087WZ62 844 aa18.59■□□□□ 0.57
PTPN6-221ENST00000543120 GRM6O15303 877 aa18.59■□□□□ 0.57
PTPN6-221ENST00000543120 YWHABP31946 246 aaKnown RBP18.59■□□□□ 0.57
PTPN6-221ENST00000543120 MCM7P33993 719 aa18.59■□□□□ 0.57
PTPN6-221ENST00000543120 HMGN5P82970 282 aaKnown RBP18.59■□□□□ 0.57
PTPN6-221ENST00000543120 SAFBQ15424 915 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTPN6-221ENST00000543120 ZNF174Q15697 407 aa18.59■□□□□ 0.57
PTPN6-221ENST00000543120 RHPN2Q8IUC4 686 aa18.59■□□□□ 0.57
PTPN6-221ENST00000543120 ZNF710Q8N1W2 664 aa18.59■□□□□ 0.57
PTPN6-221ENST00000543120 TMEM143Q96AN5 459 aa18.59■□□□□ 0.57
PTPN6-221ENST00000543120 FDXACB1Q9BRP7 624 aaPredicted RBP18.59■□□□□ 0.57
PTPN6-221ENST00000543120 FOXP1Q9H334 677 aaPredicted RBP18.59■□□□□ 0.57
PTPN6-221ENST00000543120 ZSWIM4Q9H7M6 989 aa18.59■□□□□ 0.57
PTPN6-221ENST00000543120 RB1P06400 928 aa18.58■□□□□ 0.56
PTPN6-221ENST00000543120 FGFR1P11362 822 aa18.58■□□□□ 0.56
PTPN6-221ENST00000543120 BMP1P13497 986 aa18.58■□□□□ 0.56
PTPN6-221ENST00000543120 DNM2P50570 870 aa18.58■□□□□ 0.56
PTPN6-221ENST00000543120 KCNQ1P51787 676 aa18.58■□□□□ 0.56
PTPN6-221ENST00000543120 FAM43BQ6ZT52 329 aaPredicted RBP18.58■□□□□ 0.56
PTPN6-221ENST00000543120 SCLT1Q96NL6 688 aa18.58■□□□□ 0.56
PTPN6-221ENST00000543120 DHX33Q9H6R0 707 aaKnown RBP18.58■□□□□ 0.56
PTPN6-221ENST00000543120 BMP2KQ9NSY1 1161 aaPredicted RBP18.58■□□□□ 0.56
PTPN6-221ENST00000543120 RNF19AQ9NV58 838 aa18.58■□□□□ 0.56
PTPN6-221ENST00000543120 HCSTQ9UBK5 93 aa18.58■□□□□ 0.56
PTPN6-221ENST00000543120 EVPLQ92817 2033 aa18.57■□□□□ 0.56
PTPN6-221ENST00000543120 TBKBP1A7MCY6 615 aa18.57■□□□□ 0.56
PTPN6-221ENST00000543120 DKC1O60832 514 aaKnown RBP eCLIP18.57■□□□□ 0.56
PTPN6-221ENST00000543120 CAMK1Q14012 370 aa18.57■□□□□ 0.56
PTPN6-221ENST00000543120 PTPROQ16827 1216 aa18.57■□□□□ 0.56
PTPN6-221ENST00000543120 FAM184AQ8NB25 1140 aa18.57■□□□□ 0.56
PTPN6-221ENST00000543120 PRPF31Q8WWY3 499 aaKnown RBP18.57■□□□□ 0.56
PTPN6-221ENST00000543120 HLA-CQ95604 372 aa18.57■□□□□ 0.56
PTPN6-221ENST00000543120 GCOM2Q9BZD3 368 aaPredicted RBP18.57■□□□□ 0.56
PTPN6-221ENST00000543120 IFT122Q9HBG6 1241 aa18.57■□□□□ 0.56
PTPN6-221ENST00000543120 ALG13Q9NP73 1137 aaKnown RBP18.57■□□□□ 0.56
PTPN6-221ENST00000543120 TMEM161AQ9NX61 479 aa18.57■□□□□ 0.56
PTPN6-221ENST00000543120 PLAGL2Q9UPG8 496 aa18.57■□□□□ 0.56
PTPN6-221ENST00000543120 MYH9P35579 1960 aaKnown RBP18.57■□□□□ 0.56
PTPN6-221ENST00000543120 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.56■□□□□ 0.56
PTPN6-221ENST00000543120 POTEMA6NI47 508 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 SPATA31C1P0DKV0 1188 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 DNAJB1P25685 340 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 CDC42EP1Q00587 391 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 NBR1Q14596 966 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 XKR9Q5GH70 373 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 TCEAL5Q5H9L2 206 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 OTUD6AQ7L8S5 288 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 ECHDC2Q86YB7 292 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 C4orf32Q8N8J7 132 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 TMX3Q96JJ7 454 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 NLRP4Q96MN2 994 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 C11orf84Q9BUA3 381 aaPredicted RBP18.56■□□□□ 0.56
PTPN6-221ENST00000543120 PLVAPQ9BX97 442 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 ELAC1Q9H777 363 aaKnown RBP18.56■□□□□ 0.56
PTPN6-221ENST00000543120 ATP6V0A4Q9HBG4 840 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 TYW1Q9NV66 732 aaKnown RBP18.56■□□□□ 0.56
PTPN6-221ENST00000543120 COG5Q9UP83 839 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 RWDD3Q9Y3V2 267 aa18.56■□□□□ 0.56
PTPN6-221ENST00000543120 COL4A4P53420 1690 aaPredicted RBP18.56■□□□□ 0.56
PTPN6-221ENST00000543120 LYPLA2O95372 231 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 ITGB1P05556 798 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 SRGAP2CP0DJJ0 459 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 ZSCAN20P17040 1043 aaPredicted RBP18.55■□□□□ 0.56
PTPN6-221ENST00000543120 RFC5P40937 340 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 TECP42680 631 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 TOB1P50616 345 aaPredicted RBP18.55■□□□□ 0.56
PTPN6-221ENST00000543120 POLGP54098 1239 aaPredicted RBP18.55■□□□□ 0.56
PTPN6-221ENST00000543120 LRRC55Q6ZSA7 311 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 ZNF410Q86VK4 478 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 NOSTRINQ8IVI9 506 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 KLHL23Q8NBE8 558 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 SPPL3Q8TCT6 385 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 SLC7A3Q8WY07 619 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 SYMPKQ92797 1274 aaKnown RBP18.55■□□□□ 0.56
PTPN6-221ENST00000543120 TBC1D32Q96NH3 1257 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 CASD1Q96PB1 797 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 JPH2Q9BR39 696 aaPredicted RBP18.55■□□□□ 0.56
PTPN6-221ENST00000543120 MINDY3Q9H8M7 445 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 XPNPEP1Q9NQW7 623 aa18.55■□□□□ 0.56
PTPN6-221ENST00000543120 A0A0U1RQF3 1178 aa18.54■□□□□ 0.56
PTPN6-221ENST00000543120 ST18O60284 1047 aa18.54■□□□□ 0.56
PTPN6-221ENST00000543120 CSPG5O95196 566 aa18.54■□□□□ 0.56
PTPN6-221ENST00000543120 U2AF2P26368 475 aaKnown RBP eCLIP18.54■□□□□ 0.56
PTPN6-221ENST00000543120 LAMTOR4Q0VGL1 99 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms