RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 MMTAG2Q9BU76 263 aaKnown RBP15.78■□□□□ 0.12
DDX11-221ENST00000542661 GCOM2Q9BZD3 368 aaPredicted RBP15.78■□□□□ 0.12
DDX11-221ENST00000542661 OSBPL7Q9BZF2 842 aa15.78■□□□□ 0.12
DDX11-221ENST00000542661 INO80BQ9C086 356 aaPredicted RBP15.78■□□□□ 0.12
DDX11-221ENST00000542661 AGO3Q9H9G7 860 aaKnown RBP15.78■□□□□ 0.12
DDX11-221ENST00000542661 CDHR5Q9HBB8 845 aa15.78■□□□□ 0.12
DDX11-221ENST00000542661 PADI3Q9ULW8 664 aa15.78■□□□□ 0.12
DDX11-221ENST00000542661 COL4A3BPQ9Y5P4 624 aa15.78■□□□□ 0.12
DDX11-221ENST00000542661 MYH15Q9Y2K3 1946 aa15.78■□□□□ 0.12
DDX11-221ENST00000542661 YEATS4O95619 227 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 EYA4O95677 639 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 BRD1O95696 1058 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 AMHP03971 560 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 MARCKSP29966 332 aaPredicted RBP15.77■□□□□ 0.12
DDX11-221ENST00000542661 PKP1Q13835 747 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 ZRSR1Q15695 479 aaKnown RBP15.77■□□□□ 0.12
DDX11-221ENST00000542661 ECM1Q16610 540 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 TCTN1Q2MV58 587 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 CABP7Q86V35 215 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 KRI1Q8N9T8 703 aaKnown RBP15.77■□□□□ 0.12
DDX11-221ENST00000542661 TMEM143Q96AN5 459 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 CALML4Q96GE6 196 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 PPP1R16BQ96T49 567 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 BHMT2Q9H2M3 363 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 FBXO2Q9UK22 296 aaPredicted RBP15.77■□□□□ 0.12
DDX11-221ENST00000542661 CFAP45Q9UL16 551 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 NOC2LQ9Y3T9 749 aaKnown RBP15.77■□□□□ 0.12
DDX11-221ENST00000542661 ATP6V1DQ9Y5K8 247 aa15.77■□□□□ 0.12
DDX11-221ENST00000542661 SZT2Q5T011 3432 aa15.77■□□□□ 0.11
DDX11-221ENST00000542661 A0A087WWV3 80 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 USO1O60763 962 aaKnown RBP15.76■□□□□ 0.11
DDX11-221ENST00000542661 DARSP14868 501 aaKnown RBP15.76■□□□□ 0.11
DDX11-221ENST00000542661 CYP11B2P19099 503 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 LAMTOR4Q0VGL1 99 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 TFDP1Q14186 410 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 RAB30Q15771 203 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 PADI6Q6TGC4 694 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 HERC6Q8IVU3 1022 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 LINC00301Q8NCQ3 95 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 TMEM40Q8WWA1 233 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 ERVK-5Q9HDB9 667 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 XPNPEP1Q9NQW7 623 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 BMP2KQ9NSY1 1161 aaPredicted RBP15.76■□□□□ 0.11
DDX11-221ENST00000542661 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
DDX11-221ENST00000542661 TFIP11Q9UBB9 837 aaKnown RBP15.76■□□□□ 0.11
DDX11-221ENST00000542661 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
DDX11-221ENST00000542661 MSRAQ9UJ68 235 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 ST3GAL5Q9UNP4 418 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 MICAL3Q7RTP6 2002 aa15.76■□□□□ 0.11
DDX11-221ENST00000542661 CHD9Q3L8U1 2897 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 A0A087WZ62 844 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 SOX1O00570 391 aaPredicted RBP15.75■□□□□ 0.11
DDX11-221ENST00000542661 SPTLC2O15270 562 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 PPP6R2O75170 966 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 ARL2P36404 184 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 TXLNAP40222 546 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 POU5F1BQ06416 359 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 NFX1Q12986 1120 aaKnown RBP15.75■□□□□ 0.11
DDX11-221ENST00000542661 RASSF8Q8NHQ8 419 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 KCNG4Q8TDN1 519 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 NLRP4Q96MN2 994 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 FDXACB1Q9BRP7 624 aaPredicted RBP15.75■□□□□ 0.11
DDX11-221ENST00000542661 CCSER1Q9C0I3 900 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 CSRNP2Q9H175 543 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
DDX11-221ENST00000542661 PCDHA11Q9Y5I1 949 aa15.75■□□□□ 0.11
DDX11-221ENST00000542661 E9PMD0 336 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 ENPP3O14638 875 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 SRGAP2CP0DJJ0 459 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 SFPQP23246 707 aaKnown RBP eCLIP15.74■□□□□ 0.11
DDX11-221ENST00000542661 ANP32AP39687 249 aaKnown RBP15.74■□□□□ 0.11
DDX11-221ENST00000542661 PHKA2P46019 1235 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 NUCB2P80303 420 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 DEFB103AP81534 67 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 GRIN1Q05586 938 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 GRB10Q13322 594 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 PCBP1Q15365 356 aaKnown RBP eCLIP15.74■□□□□ 0.11
DDX11-221ENST00000542661 TMEM119Q4V9L6 283 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 FAM109BQ6ICB4 259 aaPredicted RBP15.74■□□□□ 0.11
DDX11-221ENST00000542661 SRGAP1Q7Z6B7 1085 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 FAM228AQ86W67 206 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 KSR1Q8IVT5 923 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 MYOCDQ8IZQ8 938 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 LRCH3Q96II8 777 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 PNMA5Q96PV4 448 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 ZBED2Q9BTP6 218 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 POLR3FQ9H1D9 316 aaPredicted RBP15.74■□□□□ 0.11
DDX11-221ENST00000542661 CCDC39Q9UFE4 941 aa15.74■□□□□ 0.11
DDX11-221ENST00000542661 TMEM265A0A087WTH1 108 aa15.73■□□□□ 0.11
DDX11-221ENST00000542661 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.73■□□□□ 0.11
DDX11-221ENST00000542661 DENND3A2RUS2 1198 aa15.73■□□□□ 0.11
DDX11-221ENST00000542661 GRXCR1A8MXD5 290 aa15.73■□□□□ 0.11
DDX11-221ENST00000542661 GJB5O95377 273 aa15.73■□□□□ 0.11
DDX11-221ENST00000542661 DNAJB2P25686 324 aa15.73■□□□□ 0.11
DDX11-221ENST00000542661 FOXD4L6Q3SYB3 417 aaPredicted RBP15.73■□□□□ 0.11
DDX11-221ENST00000542661 FAM102BQ5T8I3 360 aa15.73■□□□□ 0.11
DDX11-221ENST00000542661 FOXD4L3Q6VB84 417 aaPredicted RBP15.73■□□□□ 0.11
DDX11-221ENST00000542661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.73■□□□□ 0.11
DDX11-221ENST00000542661 RNF149Q8NC42 400 aa15.73■□□□□ 0.11
DDX11-221ENST00000542661 KIFAP3Q92845 792 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms