RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 ATAD5Q96QE3 1844 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 C6orf229H3BNL8 230 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 RGS16O15492 202 aaPredicted RBP16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 SLC37A4O43826 429 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 ALADP13716 330 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 CALRP27797 417 aaKnown RBP16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 HOXA10P31260 410 aaPredicted RBP16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 CDK8P49336 464 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 EIF3BP55884 814 aaKnown RBP16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 TRIM59Q8IWR1 403 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 RASGEF1CQ8N431 466 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 RBM46Q8TBY0 533 aaKnown RBP16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 RAD54LQ92698 747 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 MLXIPLQ9NP71 852 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 OSGEPQ9NPF4 335 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 DBR1Q9UK59 544 aaKnown RBP16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 SNED1Q8TER0 1413 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 AP1G2O75843 785 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 ZNF211Q13398 564 aaPredicted RBP16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 NT5DC3Q86UY8 548 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 FBXO25Q8TCJ0 367 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 CCHCR1Q8TD31 782 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 SNX29Q8TEQ0 813 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 SEMA4AQ9H3S1 761 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 RIC8AQ9NPQ8 531 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 ZDHHC18Q9NUE0 388 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 AJAP1Q9UKB5 411 aaPredicted RBP16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 STXBP5LQ9Y2K9 1186 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 NPHP3-ACAD11A0A0J9YXS1 232 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 FOXO6A8MYZ6 492 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 TDP2O95551 362 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 KCNH2Q12809 1159 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 DCAF12L1Q5VU92 463 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 DENND2CQ68D51 928 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 NEK9Q8TD19 979 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 KLHL29Q96CT2 875 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 FGFR1OP2Q9NVK5 253 aa16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 DDX60LQ5H9U9 1706 aaKnown RBP16.09■□□□□ 0.17
AC005840.4-201ENST00000541242 BTNL10A8MVZ5 291 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 RIMBP2O15034 1052 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 EVI5O60447 810 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 SNX3O60493 162 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 LINGO3P0C6S8 592 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 FGFR4P22455 802 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 CALCRLQ16602 461 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 SLC27A3Q5K4L6 730 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 AADACL2Q6P093 401 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 C16orf86Q6ZW13 317 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 PABPC3Q9H361 631 aaKnown RBP16.08■□□□□ 0.17
AC005840.4-201ENST00000541242 PALM3A6NDB9 673 aaPredicted RBP16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 DR1Q01658 176 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 KLRC3Q07444 240 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 ANKRD20A2Q5SQ80 823 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 ANKRD20A1Q5TYW2 823 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 ANKRD20A3Q5VUR7 823 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 GJB7Q6PEY0 223 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 OTUD6AQ7L8S5 288 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 DNAJC19Q96DA6 116 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 CRAMP1Q96RY5 1269 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 EYA3Q99504 573 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 STK17AQ9UEE5 414 aa16.08■□□□□ 0.16
AC005840.4-201ENST00000541242 KLRG2A4D1S0 409 aaPredicted RBP16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 CREB1P16220 341 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 CCND1P24385 295 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 GTF2IP78347 998 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 MAP2K1Q02750 393 aaPredicted RBP16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 FAM26FQ5R3K3 315 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 PGM2Q96G03 612 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 ADAM22Q9P0K1 906 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 PPP1R9AQ9ULJ8 1098 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 NUDT17P0C025 328 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 UCHL3P15374 230 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 DUPD1Q68J44 220 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 TRIM68Q6AZZ1 485 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 GALNT17Q6IS24 598 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 ZDHHC24Q6UX98 284 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 ARHGAP27Q6ZUM4 889 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 U2AF1L4Q8WU68 220 aaKnown RBP16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 FAM163AQ96GL9 167 aaPredicted RBP16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 ERP44Q9BS26 406 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 SUCLA2Q9P2R7 463 aaPredicted RBP16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 DAAM1Q9Y4D1 1078 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 GAKO14976 1311 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 RPTORQ8N122 1335 aa16.07■□□□□ 0.16
AC005840.4-201ENST00000541242 TCP11X1B4DZS4 312 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 ADAM9Q13443 819 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 SNX1Q13596 522 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 CNGA2Q16280 664 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 AP1ARQ63HQ0 302 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 SLFN11Q7Z7L1 901 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 SLC17A8Q8NDX2 589 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 HES6Q96HZ4 224 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 MTMR9Q96QG7 549 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 SH3GL3Q99963 347 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 KIF13BQ9NQT8 1826 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 CCDC169A6NNP5 214 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 MSH2P43246 934 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms