RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 ITGB5P18084 799 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 SLC9A1P19634 815 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 KLHL30Q0D2K2 578 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 TNFAIP1Q13829 316 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 TNIP1Q15025 636 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 DCAF17Q5H9S7 520 aaPredicted RBP12.36□□□□□ -0.43
LGR5-203ENST00000540815 SWT1Q5T5J6 900 aaKnown RBP12.36□□□□□ -0.43
LGR5-203ENST00000540815 GBP6Q6ZN66 633 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 ZNF720Q7Z2F6 126 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 CREG2Q8IUH2 290 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 FAM133AQ8N9E0 248 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 IL31RAQ8NI17 732 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 SLC35C1Q96A29 364 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 SALL4Q9UJQ4 1053 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 HPCAL4Q9UM19 191 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 HYOU1Q9Y4L1 999 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 AGPSO00116 658 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 NFIBO00712 420 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 ACTN1P12814 892 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 UCHL3P15374 230 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 TCP1P17987 556 aaKnown RBP12.35□□□□□ -0.43
LGR5-203ENST00000540815 ITIH3Q06033 890 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 SF3B2Q13435 895 aaKnown RBP12.35□□□□□ -0.43
LGR5-203ENST00000540815 JDP2Q8WYK2 163 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 CEP89Q96ST8 783 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 MKNK1Q9BUB5 465 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 MAP3K20Q9NYL2 800 aaKnown RBP12.35□□□□□ -0.43
LGR5-203ENST00000540815 BZW2Q9Y6E2 419 aaKnown RBP12.35□□□□□ -0.43
LGR5-203ENST00000540815 PSMC2P35998 433 aaKnown RBP12.35□□□□□ -0.43
LGR5-203ENST00000540815 GNGT1P63211 74 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 NAB2Q15742 525 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 ZC2HC1CQ53FD0 456 aaPredicted RBP12.35□□□□□ -0.43
LGR5-203ENST00000540815 IRF2BP2Q7Z5L9 587 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 SH2D3CQ8N5H7 860 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 SAMD3Q8N6K7 520 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 OSBPL9Q96SU4 736 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 TSKSQ9UJT2 592 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 UBIAD1Q9Y5Z9 338 aa12.35□□□□□ -0.43
LGR5-203ENST00000540815 ARHGEF35A5YM69 484 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 CTNND1O60716 968 aaKnown RBP12.34□□□□□ -0.43
LGR5-203ENST00000540815 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 RPS12P25398 132 aaKnown RBP12.34□□□□□ -0.43
LGR5-203ENST00000540815 MATR3P43243 847 aaKnown RBP eCLIP12.34□□□□□ -0.434e-7■■□□□ 11.4
LGR5-203ENST00000540815 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
LGR5-203ENST00000540815 C10orf76Q5T2E6 689 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 TCERG1LQ5VWI1 586 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 RPAINQ86UA6 219 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 FAM186BQ8IYM0 893 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 SLC38A10Q9HBR0 1119 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 SIX2Q9NPC8 291 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 KCNH7Q9NS40 1196 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 PCDHB13Q9Y5F0 798 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 A0A087X0T9 212 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 CCDC189A1A4V9 331 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 PPP1R12BO60237 982 aaPredicted RBP12.34□□□□□ -0.43
LGR5-203ENST00000540815 CPP00450 1065 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 FAM228BP0C875 321 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 ARID5AQ03989 594 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 PDCLQ13371 301 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 MMGT1Q8N4V1 131 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 ANKRD13CQ8N6S4 541 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 SPAG5Q96R06 1193 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.34□□□□□ -0.43
LGR5-203ENST00000540815 STRA6Q9BX79 667 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 AGO4Q9HCK5 861 aaKnown RBP12.34□□□□□ -0.43
LGR5-203ENST00000540815 DMAC2Q9NW81 257 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 PARP14Q460N5 1801 aa12.34□□□□□ -0.43
LGR5-203ENST00000540815 BTNL10A8MVZ5 291 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 DHX15O43143 795 aaKnown RBP12.33□□□□□ -0.43
LGR5-203ENST00000540815 BRD2P25440 801 aaKnown RBP12.33□□□□□ -0.43
LGR5-203ENST00000540815 ANXA13P27216 316 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 PRKCIP41743 596 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 JAM2P57087 298 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 TKFCQ3LXA3 575 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 ODR4Q5SWX8 454 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 HS2ST1Q7LGA3 356 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 SYTL5Q8TDW5 730 aaPredicted RBP12.33□□□□□ -0.43
LGR5-203ENST00000540815 COG1Q8WTW3 980 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 HDAC7Q8WUI4 952 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 PSMB7Q99436 277 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 GCNT4Q9P109 453 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 DOCK1Q14185 1865 aa12.33□□□□□ -0.43
LGR5-203ENST00000540815 GOLGA6CA6NDK9 693 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 DDX39AO00148 427 aaKnown RBP12.33□□□□□ -0.44
LGR5-203ENST00000540815 BUB1O43683 1085 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 HIP1RO75146 1068 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 NEBLO76041 1014 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 P4HBP07237 508 aaKnown RBP12.33□□□□□ -0.44
LGR5-203ENST00000540815 GOLGA6DP0CG33 693 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 ALAS1P13196 640 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 C2orf54Q08AI8 447 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 MAPK7Q13164 816 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 NFRKBQ6P4R8 1299 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 CEP57Q86XR8 500 aa12.33□□□□□ -0.44
LGR5-203ENST00000540815 N4BP2L2Q92802 583 aaPredicted RBP12.33□□□□□ -0.44
LGR5-203ENST00000540815 TLR10Q9BXR5 811 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms