RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	GPR25	O00155	361 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KLRC4	O43908	158 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TLR2	O60603	784 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PPP1R37	O75864	691 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NEDD9	Q14511	834 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	HLTF	Q14527	1009 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EMB	Q6PCB8	327 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	STXBP4	Q6ZWJ1	553 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CCDC84	Q86UT8	332 aa	Predicted RBP	6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DDX42	Q86XP3	938 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RIOX2	Q8IUF8	465 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CCDC170	Q8IYT3	715 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MYCBPAP	Q8TBZ2	947 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	N4BP2L2	Q92802	583 aa	Predicted RBP	6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	P2RX7	Q99572	595 aa	Known RBP	6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	THAP9	Q9H5L6	903 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SLC39A2	Q9NP94	309 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DISC1	Q9NRI5	854 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CHD4	Q14839	1912 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CHRM1	P11229	460 aa	Predicted RBP	6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PRELP	P51888	382 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ASIC1	P78348	528 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TROAP	Q12815	778 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	INF2	Q27J81	1249 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TDRD12	Q587J7	1177 aa	Known RBP	6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MIIP	Q5JXC2	388 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SLFN12	Q8IYM2	578 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	IQCK	Q8N0W5	287 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PIK3R5	Q8WYR1	880 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RMDN3	Q96TC7	470 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GOLPH3	Q9H4A6	298 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SLC40A1	Q9NP59	571 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CNTNAP1	P78357	1384 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	LRRC53	A6NM62	1247 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KPNA6	O60684	536 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	FSBP	O95073	299 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RPSA	P08865	295 aa	Known RBP	6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RARB	P10826	455 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GNAT1	P11488	350 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	AMPD3	Q01432	767 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ODR4	Q5SWX8	454 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KRT79	Q5XKE5	535 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DTHD1	Q6ZMT9	781 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	IFT20	Q8IY31	132 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ADGRF4	Q8IZF3	695 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CASKIN2	Q8WXE0	1202 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	P2RX5	Q93086	422 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ALS2CR12	Q96Q35	445 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	WDR11	Q9BZH6	1224 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	HAUS2	Q9NVX0	235 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PLAA	Q9Y263	795 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PLIN4	Q96Q06	1357 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GOLGA6L7	A0A1B0GV03	622 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	OPLAH	O14841	1288 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TCP1	P17987	556 aa	Known RBP	6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MDH1	P40925	334 aa	Known RBP	6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TRAPPC10	P48553	1259 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MAP3K10	Q02779	954 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EHHADH	Q08426	723 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	QPCT	Q16769	361 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ODF2	Q5BJF6	829 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SH3BP5L	Q7L8J4	393 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RNF180	Q86T96	592 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ABRA	Q8N0Z2	381 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SCFD2	Q8WU76	684 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	BRI3BP	Q8WY22	251 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	IWS1	Q96ST2	819 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	APBA2	Q99767	749 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MTIF3	Q9H2K0	278 aa	Known RBP	6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	HMX1	Q9NP08	348 aa	Predicted RBP	6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DONSON	Q9NYP3	566 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CHUK	O15111	745 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	FGR	P09769	529 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EPB41	P11171	864 aa	Known RBP	6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CDR1	P51861	262 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ORC2	Q13416	577 aa	Predicted RBP	6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KLHDC7A	Q5VTJ3	777 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KDM7A	Q6ZMT4	941 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CCDC121	Q6ZUS5	278 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MICALCL	Q6ZW33	695 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	C4orf32	Q8N8J7	132 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NUP58	Q9BVL2	599 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TSGA10	Q9BZW7	698 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NRBP2	Q9NSY0	501 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ODF2L	Q9ULJ1	636 aa		6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DDX60	Q8IY21	1712 aa	Known RBP	6.17	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DNM1L	O00429	736 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	VWA5A	O00534	786 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MAFG	O15525	162 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GAS7	O60861	476 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PALM	O75781	387 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RPLP2	P05387	115 aa	Known RBP	6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PLCG1	P19174	1290 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TM4SF4	P48230	202 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MAP2K5	Q13163	448 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DGKZ	Q13574	1117 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	LRRC41	Q15345	812 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CFAP221	Q4G0U5	840 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DYM	Q7RTS9	669 aa		6.16	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SLC51A	Q86UW1	340 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms