RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 SFR1Q86XK3 245 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 HOOK2Q96ED9 719 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 MS4A14Q96JA4 679 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 TRIM34Q9BYJ4 488 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 TYW1Q9NV66 732 aaKnown RBP15.89■□□□□ 0.13
CDCA3-207ENST00000538862 SNCAIPQ9Y6H5 919 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 FAM86B1E9PN63 330 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 CYP3A4P08684 503 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 FAM86B2P0C5J1 330 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 PON1P27169 355 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 ARID5AQ03989 594 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 PTK2Q05397 1052 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 SYDE2Q5VT97 1194 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 INPP4AQ96PE3 977 aaPredicted RBP15.88■□□□□ 0.13
CDCA3-207ENST00000538862 SPAG5Q96R06 1193 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 RRP15Q9Y3B9 282 aaKnown RBP15.88■□□□□ 0.13
CDCA3-207ENST00000538862 UNCXA6NJT0 531 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 A6NNZ2 444 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 MYO1CO00159 1063 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 HSF2BPO75031 334 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 EYA4O95677 639 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 FTCDO95954 541 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 ZBTB48P10074 688 aaPredicted RBP15.88■□□□□ 0.13
CDCA3-207ENST00000538862 SLC9A1P19634 815 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 PAK2Q13177 524 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 TUBB8Q3ZCM7 444 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 BTNL9Q6UXG8 535 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 PACSIN1Q9BY11 444 aa15.88■□□□□ 0.13
CDCA3-207ENST00000538862 GTPBP10A4D1E9 387 aaKnown RBP15.87■□□□□ 0.13
CDCA3-207ENST00000538862 MEIS1O00470 390 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 MSH4O15457 936 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 CA12O43570 354 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 GAP43P17677 238 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 TM4SF4P48230 202 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 EPHA7Q15375 998 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 ABCB5Q2M3G0 1257 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 ZNF571Q7Z3V5 609 aaPredicted RBP15.87■□□□□ 0.13
CDCA3-207ENST00000538862 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.87■□□□□ 0.131e-6■■■■■ 56.2
CDCA3-207ENST00000538862 TAF4BQ92750 862 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 OLFML3Q9NRN5 406 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 FEZ2Q9UHY8 353 aaPredicted RBP15.87■□□□□ 0.13
CDCA3-207ENST00000538862 VAV3Q9UKW4 847 aa15.87■□□□□ 0.13
CDCA3-207ENST00000538862 PIK3CDO00329 1044 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 NDUFB10O96000 172 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 NR3C1P04150 777 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 GLI1P08151 1106 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 ACTN1P12814 892 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 TNNC1P63316 161 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 MRPS25P82663 173 aaKnown RBP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 SREBF2Q12772 1141 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 RPS6KA1Q15418 735 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 SHROOM1Q2M3G4 852 aaPredicted RBP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 MREGQ8N565 214 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 EIF1ADQ8N9N8 165 aaKnown RBP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 USP38Q8NB14 1042 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 TSEN2Q8NCE0 465 aaKnown RBP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 PBKQ96KB5 322 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 TRERF1Q96PN7 1200 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 RUFY1Q96T51 708 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 ZNF112Q9UJU3 913 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 NAGPAQ9UK23 515 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 TMEM59LQ9UK28 342 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 SYNPO2Q9UMS6 1093 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 IGF2BP3O00425 579 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 EIF3DO15371 548 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 TBCAO75347 108 aaKnown RBP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 AKAP3O75969 853 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 HEXIM1O94992 359 aaKnown RBP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 MYBP10242 640 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 BMP3P12645 472 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 TRAF1Q13077 416 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 NFIL3Q16649 462 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 USH1GQ495M9 461 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 FOXR1Q6PIV2 292 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 VPS36Q86VN1 386 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 EIF2AK1Q9BQI3 630 aaKnown RBP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 EPB41L5Q9HCM4 733 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.86■□□□□ 0.13
CDCA3-207ENST00000538862 NENFQ9UMX5 172 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 RABGAP1Q9Y3P9 1069 aa15.86■□□□□ 0.13
CDCA3-207ENST00000538862 ASTN1O14525 1302 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 MANSC4A6NHS7 340 aaPredicted RBP15.85■□□□□ 0.13
CDCA3-207ENST00000538862 SPDYE5A6NIY4 337 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 PHF20L1A8MW92 1017 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 FLOT1O75955 427 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 JAM2P57087 298 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 ENOX2Q16206 610 aaKnown RBP15.85■□□□□ 0.13
CDCA3-207ENST00000538862 ALKBH5Q6P6C2 394 aaKnown RBP15.85■□□□□ 0.13
CDCA3-207ENST00000538862 WHAMMQ8TF30 809 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 BHMT2Q9H2M3 363 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 R3HDMLQ9H3Y0 253 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 TUFT1Q9NNX1 390 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 SAGE1Q9NXZ1 904 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 LCMT1Q9UIC8 334 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 INTUQ9ULD6 942 aa15.85■□□□□ 0.13
CDCA3-207ENST00000538862 A0A0A6YYK5 440 aaPredicted RBP15.84■□□□□ 0.13
CDCA3-207ENST00000538862 OPLAHO14841 1288 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms