RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CCDC149Q6ZUS6 474 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 TRMT1LQ7Z2T5 733 aaKnown RBP5.98□□□□□ -1.45
CHD4-205ENST00000536301 ZNF598Q86UK7 904 aaKnown RBP5.98□□□□□ -1.45
CHD4-205ENST00000536301 CABP7Q86V35 215 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 C1orf210Q8IVY1 113 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 CCDC60Q8IWA6 550 aaPredicted RBP5.98□□□□□ -1.45
CHD4-205ENST00000536301 VPS52Q8N1B4 723 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 CMTR1Q8N1G2 835 aaKnown RBP5.98□□□□□ -1.45
CHD4-205ENST00000536301 LRRC43Q8N309 656 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 NME8Q8N427 588 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 SLC44A3Q8N4M1 653 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 GIMAP8Q8ND71 665 aaPredicted RBP5.98□□□□□ -1.45
CHD4-205ENST00000536301 LPPQ93052 612 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 RILPL2Q969X0 211 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 UBAC1Q9BSL1 405 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 MYL10Q9BUA6 226 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 RPP25Q9BUL9 199 aaKnown RBP5.98□□□□□ -1.45
CHD4-205ENST00000536301 SEMA4AQ9H3S1 761 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 CHMP4BQ9H444 224 aaKnown RBP5.98□□□□□ -1.45
CHD4-205ENST00000536301 ELAC1Q9H777 363 aaKnown RBP5.98□□□□□ -1.45
CHD4-205ENST00000536301 JPH1Q9HDC5 661 aaPredicted RBP5.98□□□□□ -1.45
CHD4-205ENST00000536301 JADE2Q9NQC1 790 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 DZANK1Q9NVP4 752 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 SLC9A2Q9UBY0 812 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 RCAN3Q9UKA8 241 aa5.98□□□□□ -1.45
CHD4-205ENST00000536301 IGF2RP11717 2491 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 PIK3CDO00329 1044 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 GPR182O15218 404 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 ZC3H11AO75152 810 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD4-205ENST00000536301 CSDE1O75534 798 aaKnown RBP5.97□□□□□ -1.45
CHD4-205ENST00000536301 ATG7O95352 703 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 PLEKHA8P1O95397 391 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 C22orf31O95567 290 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 SSBP05455 408 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD4-205ENST00000536301 ADRB1P08588 477 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 CRYBB1P53674 252 aaPredicted RBP5.97□□□□□ -1.45
CHD4-205ENST00000536301 ANTXR2P58335 489 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 KRT17Q04695 432 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 PTPN14Q15678 1187 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 LETM2Q2VYF4 491 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 VARS2Q5ST30 1063 aaKnown RBP5.97□□□□□ -1.45
CHD4-205ENST00000536301 TSSK4Q6SA08 328 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 CWC27Q6UX04 472 aaKnown RBP5.97□□□□□ -1.45
CHD4-205ENST00000536301 OTOP3Q7RTS5 596 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 PLPPR4Q7Z2D5 763 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 RAB11FIP4Q86YS3 637 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 ACSF2Q96CM8 615 aaPredicted RBP5.97□□□□□ -1.45
CHD4-205ENST00000536301 KLHL5Q96PQ7 755 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 ADAMTS10Q9H324 1103 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 AZI2Q9H6S1 392 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 NRDE2Q9H7Z3 1164 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 SFXN1Q9H9B4 322 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 KCNH7Q9NS40 1196 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 RNF216Q9NWF9 866 aaPredicted RBP5.97□□□□□ -1.45
CHD4-205ENST00000536301 WNT16Q9UBV4 365 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 DNAJB4Q9UDY4 337 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 PCDHA6Q9UN73 950 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 MTF2Q9Y483 593 aaPredicted RBP5.97□□□□□ -1.45
CHD4-205ENST00000536301 PCDHA8Q9Y5H6 950 aa5.97□□□□□ -1.45
CHD4-205ENST00000536301 ASPMQ8IZT6 3477 aa5.96□□□□□ -1.45
CHD4-205ENST00000536301 IGKV6D-21A0A0A0MT36 114 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 IFIT3O14879 490 aaKnown RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 ADAMTS3O15072 1205 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 HBP1O60381 514 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 KINO60870 393 aaKnown RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 LILRB3O75022 631 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 RFPL2O75678 378 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 RPLP2P05387 115 aaKnown RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 GALTP07902 379 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 CNPP09543 421 aaKnown RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 SRFP11831 508 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 RXRAP19793 462 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 RFX1P22670 979 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 GBP2P32456 591 aaPredicted RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 SLC11A1P49279 550 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 CLCN4P51793 760 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 AFF1P51825 1210 aaKnown RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 IMMTQ16891 758 aaKnown RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 KIAA0319Q5VV43 1072 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 TYW1BQ6NUM6 668 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 ABHD15Q6UXT9 468 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 ABI1Q8IZP0 508 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 LRRC71Q8N4P6 559 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 SRBD1Q8N5C6 995 aaKnown RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 LINC01465Q8N7H1 131 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 PJA1Q8NG27 643 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 CUL5Q93034 780 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 ZNF707Q96C28 371 aaPredicted RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 TMEM169Q96HH4 297 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 IGSF21Q96ID5 467 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 CDHR1Q96JP9 859 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 MXRA8Q9BRK3 442 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 DSCC1Q9BVC3 393 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 KRT23Q9C075 422 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 LNPKQ9C0E8 428 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 GBP3Q9H0R5 595 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 AGO4Q9HCK5 861 aaKnown RBP5.96□□□□□ -1.46
CHD4-205ENST00000536301 MAN1C1Q9NR34 630 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 ARHGEF3Q9NR81 526 aa5.96□□□□□ -1.46
CHD4-205ENST00000536301 IGSF9Q9P2J2 1179 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms